Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02166 atggaAGGAACAAAAAAGAGGGTATTTGCTTCATCAATTTCACCAACAATGGTGTTTCTGTTTCTGGGTTTTGCTATTCTTCTCATTTTACCAATGGCATCAGCTGCAAAAGTTACAGTTGGTGGTAAAATGGGTTGGACAACAAATTTCAATTACACTACTTGGGCTAAGGGAAAGCATTTCTACAATGGTGATTGGCTTTTTTTTGTGTATGATAGGAACCAACAGAATGTACTAGAAGTGAACAAAACAGATTATGAAACTTGTAACTCAGATCATCCACTACACAATTGGACAACCGGAGCTGGAAGAGATGTCGTACCATTGAACGTGACTCGACATTACTATTTTATAAGTGGCAAAGGATTTTGTTTTGGTGGAATGAAAATTGCTGTTCATGTTGAAAAtctaccaccaccaccaaaagCTTCACCTATAAAATCTTTTGCACCAACCCTTTCTTCTAAAGGACATATCTTTCTCATGCCTATTGTTTTTGCTATTGGTGCAGCTTGggattcattcatttatttatggTAA 540 0.3352 MEGTKKRVFASSISPTMVFLFLGFAILLILPMASAAKVTVGGKMGWTTNFNYTTWAKGKHFYNGDWLFFVYDRNQQNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFGGMKIAVHVENLPPPPKASPIKSFAPTLSSKGHIFLMPIVFAIGAAWDSFIYLW 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02166 179 Gene3D - 34 137 IPR008972 -
Tsu06g02166 179 ProSiteProfiles Phytocyanin domain profile. 36 136 IPR003245 GO:0009055
Tsu06g02166 179 PANTHER BLUE COPPER PROTEIN 13 171 IPR039391 GO:0009055
Tsu06g02166 179 PANTHER LAMIN-LIKE PROTEIN 13 171 - -
Tsu06g02166 179 Pfam Plastocyanin-like domain 46 128 IPR003245 GO:0009055
Tsu06g02166 179 SUPERFAMILY Cupredoxins 35 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02166 Tsu-Chr6 27184320 27186851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02166 20 179 Phytocyanin Superfamily AT5G15350 53.704 3.30e-62 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02166 - - mtr:MTR_6g013420 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02166 06 27184320 27186851 Tsu06g02166 06 27184320 27186851 ECH