Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02163 ATGAAATCTCTAATTGAAGGCGTGCCGGTCAATCAAAATCTCTATTTCCGTCTTGTGTTTCTGCGGTTGTTTAAGTTAGCTTGGACTTTGGTTAAAGGAAAAGGTTCTGGTCCTACAATTTATAGTACATTGATTAAGAAAGTTGGGGATTTGACTTTCTTGGAAAAAGATGATGGCTTAGCTTCGTTGGAAATCATTGGAACAGGTGGATGTGGTGCGGTTTACAAGGCAGGATTACCAGGAAGTAATGGTAAAATGATTGCTATCAAGAAGATTATTGTAGATGAGGCTGAAGAAGATAGTAATAACATGAAGAAAATTAAAATGATAGTTATGTTGGAGAAAGTTAAAGACGGTGAAGCAGAGATGGATTGGTTGTCAAGACATAAGATTGCGCTTGGTATCACATTTGGTCTTGAATACCTTGACACGAGCCATAGTCCGTGTATAATTCATCGAGATCTCAAGCCTGCAAACATTCTTCTTGATGATGATATGGAAGCTAAGATTGCAGATTTTGGACTTGCAAAAGCAATGCCTGATGCACAAAGCTGGGGATTTGGCTTTCTTGAAAAAGATGACGGCTTAGCTTCGTTGGAAATCATTGGAATAGGTGGATGTGGTGCGGTTTACAAGGCAGAATTACCAGGAAGTAATGGTAAAATGATTGCTATCAAGAAGATTATTGTGGATGAGGCTGAAGAAGATTGTAATAACATGGAGAAAATTAAGTCAGAGATTGATACCGTTGGTCACATTCATCATCGAAACCTTGTGCCTTTGTTGGCTCATATCTAG 798 0.386 MKSLIEGVPVNQNLYFRLVFLRLFKLAWTLVKGKGSGPTIYSTLIKKVGDLTFLEKDDGLASLEIIGTGGCGAVYKAGLPGSNGKMIAIKKIIVDEAEEDSNNMKKIKMIVMLEKVKDGEAEMDWLSRHKIALGITFGLEYLDTSHSPCIIHRDLKPANILLDDDMEAKIADFGLAKAMPDAQSWGFGFLEKDDGLASLEIIGIGGCGAVYKAELPGSNGKMIAIKKIIVDEAEEDCNNMEKIKSEIDTVGHIHHRNLVPLLAHI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02163 265 SUPERFAMILY Protein kinase-like (PK-like) 52 184 IPR011009 -
Tsu06g02163 265 Gene3D Phosphorylase Kinase; domain 1 198 265 - -
Tsu06g02163 265 Gene3D Phosphorylase Kinase; domain 1 52 115 - -
Tsu06g02163 265 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02163 265 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 190 264 - -
Tsu06g02163 265 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 100 - -
Tsu06g02163 265 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 112 184 - -
Tsu06g02163 265 Gene3D Transferase(Phosphotransferase) domain 1 116 197 - -
Tsu06g02163 265 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 112 184 - -
Tsu06g02163 265 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 190 264 - -
Tsu06g02163 265 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 19 100 - -
Tsu06g02163 265 SMART serkin_6 60 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02163 265 Pfam Protein kinase domain 129 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02163 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Tsu06g02163 265 SUPERFAMILY Protein kinase-like (PK-like) 195 263 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02163 Tsu-Chr6 27159142 27160510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02163 187 265 Receptor kinase-like Gene Family AT2G31880 60.674 6.34e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Tsu06g02163 Pkinase 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02163 - - gmx:100811980 201.445