Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02162 ATGGAAGTTAAGATTGTGGATTTTGGACTTGCAAAAGCAATGTCTGATGCACAAACACATATTAGTACTTCGAAACCGGCTGGCACTTTAGGATATATCGCGCCTGAATATCGTGAGATAAACCGATTAAGTGACAAGTGTGACATATATAGCTTTGGTGTTTTGCTTGGTTTTTTGGTAACGGGAAAATCTCCTATTGCTAATTGGGGCTCGATGTTAAGTTTGATTGAGTGGATGAGAAATactataatttcaaaaaatccgaAGGACGCAATCGATGCAAGGCTCATTGGTAATGGTTTTGAGGAACAAATGCTCCCGGTTATGCAGATTGCCTGCTACTGCACCATGAAAAATCCTGAGGAGAGACCTGACATTAAGAATGTTAGGATCAtgttgtactccctccgtcccatagtatga 423 0.3593 MEVKIVDFGLAKAMSDAQTHISTSKPAGTLGYIAPEYREINRLSDKCDIYSFGVLLGFLVTGKSPIANWGSMLSLIEWMRNTIISKNPKDAIDARLIGNGFEEQMLPVMQIACYCTMKNPEERPDIKNVRIMLYSLRPIV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02162 140 SUPERFAMILY Protein kinase-like (PK-like) 2 134 IPR011009 -
Tsu06g02162 140 Pfam Protein kinase domain 2 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02162 140 Gene3D Transferase(Phosphotransferase) domain 1 1 138 - -
Tsu06g02162 140 PANTHER OS06G0288100 PROTEIN 1 134 - -
Tsu06g02162 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02162 140 PANTHER OS01G0253100 PROTEIN 1 134 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02162 Tsu-Chr6 27158504 27158926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02162 1 137 Receptor kinase-like Gene Family AT2G31880 57.143 1.46e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tsu06g02162 Pkinase 3.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02162 - - adu:107469864 179.489