Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02159 ATGAATTTGCTAGAAGTGAACAAAAGAGATTATGAAACTTGTAACTCACATCATCCAATTCACAATTGGGCAGCTGGAGCTGGAAGAGATGTTGTTCCATCGAATGTGACTCACAATTACTATTTGATAAGTGGCAAAGGATTTTGCCGTCATGGCATGAAGATATTCATGTTAaaaatcaccaccaccaccagaaGCTGCGCTAAAGAACAGTGGAGGAGCAGCAACTCTGTCCTCCTCAAAGCTACATTCTGGTCTTTCAGTCACTAG 270 0.3778 MNLLEVNKRDYETCNSHHPIHNWAAGAGRDVVPSNVTHNYYLISGKGFCRHGMKIFMLKITTTTRSCAKEQWRSSNSVLLKATFWSFSH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02159 89 SUPERFAMILY Cupredoxins 2 56 IPR008972 -
Tsu06g02159 89 Pfam Plastocyanin-like domain 2 53 IPR003245 GO:0009055
Tsu06g02159 89 Gene3D - 1 59 IPR008972 -
Tsu06g02159 89 PANTHER BLUE COPPER PROTEIN 1 62 IPR039391 GO:0009055
Tsu06g02159 89 PANTHER LAMIN-LIKE PROTEIN 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02159 Tsu-Chr6 27150052 27150321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02159 2 58 Phytocyanin Superfamily AT4G12880 56.140 2.23e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02159 - - rcu:8281276 99.7525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02159 06 27150052 27150321 Tsu06g02159 06 27150052 27150321 ECH