Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02157 ATGGAAAATTCATCAAGAGTGATGTTGATGATGAGTGTGATAGTTTTGGGAATGTTGTCATTGTGGCCAATGGTGGTTATGGGAAAACCAGTGCTTCATAAGGTGGGAGGAGCCAAAGGTTGGAATCAAAATGTCAATTACACTATATGGTCTTCTCAAGAGCATGTTTATGTTGGCGATTGGCTAATTTTTAAGTTTGACAAAAGATACTACAATGTCTTGGAAGTAAACAAGACAGGCTATGAGAATTGCATAGACTTCACTTTCATAAAAAACGTCACGCGAGGAGGTCGTGACGTGGTTCAATTGACAGAAGCAAAGACATACTACTTTCTCTCTGCCGGAGGTTATTGCTTTCATGGAATGAAAGTTGCCGTGAACGTTCGAGACCACCAATCAGCTGCACCGTCTCCATCTCTTTCCGATACGGCAAAATCTAGTGGTGGCTCTATTTTGCCTTCTTTGTACACATGCTTTGGAATTATTATTGCTAATGTGGTTTATGTGAGTTTGGTTTCAATGGGGATTTTGTAA 534 0.4026 MENSSRVMLMMSVIVLGMLSLWPMVVMGKPVLHKVGGAKGWNQNVNYTIWSSQEHVYVGDWLIFKFDKRYYNVLEVNKTGYENCIDFTFIKNVTRGGRDVVQLTEAKTYYFLSAGGYCFHGMKVAVNVRDHQSAAPSPSLSDTAKSSGGSILPSLYTCFGIIIANVVYVSLVSMGIL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02157 177 PANTHER BLUE COPPER PROTEIN 10 160 IPR039391 GO:0009055
Tsu06g02157 177 Pfam Plastocyanin-like domain 41 122 IPR003245 GO:0009055
Tsu06g02157 177 Gene3D - 32 139 IPR008972 -
Tsu06g02157 177 ProSiteProfiles Phytocyanin domain profile. 31 130 IPR003245 GO:0009055
Tsu06g02157 177 SUPERFAMILY Cupredoxins 32 128 IPR008972 -
Tsu06g02157 177 PANTHER EARLY NODULIN-LIKE PROTEIN 20 10 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02157 Tsu-Chr6 27143505 27145643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02157 24 163 Phytocyanin Superfamily AT2G27035 41.844 3.23e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02157 - - gmx:100788336 224.172