Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02115 ATGGAACCAGACACTGAAGAACAATTTTCTAGTCAAACTGATGATTCCTGTGAGATGATGGAACTAGACGTTGAAGACCAATTTTCTAGTCAAAATAACGATTCCTGTGagGGTTTGGAAACTGAAAGTGTACCAATCAATATAAATGTTGATTACAACTTACATAGAATTCCTATAAACGGCGTAGAAGATATGGGTGGAATAGATTTTAAGAAATTTACAACAATTGATATAATGAAGTATGATTTTCCTAATCTTGAGGTGGCTTTTACATTTTACAATTGGTATGCTCGAATGCATGGATTTGCTGGCCGCAAAAacaggaaaagaaaaaacaaacacaatgaGGTCGTCCAACAGGAATTTGTGTGTTACATGCAAGGGTTTAGAAAAGATCGATTTAAGGAAAACAAAAAGCGTGTGCGTGAAGTAAAGGCAATTACAAGATGCGGTTGTCGGGCAAAGTGTGTTGTGCATGTTGATTCTATCAGTCAGCGTTGGTGTATAAGGTTTATTGATGATGTGCATAATCACCCATTTGTTGAACAagaatttattatgtttctacCAGGTCATAGGGGAATGGATGATGATGACATACTTCAAATGAATTACTTTAAGAAGTCGGGTATTAGGACGTCACAAGTATTTGGAACATTTGCTAATCAAGTTGGTGGGTACGAGCATGTCACTTTCTCACTTCGAGACATGTATAATGTAGTAGACAAGGAAAGGCGTTCTAAAGGTACCGACTCAAGAGCTGCATTAGCATATTTGCGTTCTTTGAAGAGTTATGACCCAACAATGTACTGGAAGCATACAGTTGATAAGGAAGGAGTAAATCACCACAACCAAACTACAGTATTTGCCACTACTGTTGTTGCCAATGAGATTGAAGAAACATATGTTTGGTTGCTTGAATGTTTGTTGGAAGCAATGAACGACAAGATGCCAAAATCTGTCATAACGGATGGTGACTTAGCAATGAAGAATGCAATCAGAAGGGTGTTACCTGATTCCCACCATAGATTATGCGCTTGA 1041 0.3641 MEPDTEEQFSSQTDDSCEMMELDVEDQFSSQNNDSCEGLETESVPININVDYNLHRIPINGVEDMGGIDFKKFTTIDIMKYDFPNLEVAFTFYNWYARMHGFAGRKNRKRKNKHNEVVQQEFVCYMQGFRKDRFKENKKRVREVKAITRCGCRAKCVVHVDSISQRWCIRFIDDVHNHPFVEQEFIMFLPGHRGMDDDDILQMNYFKKSGIRTSQVFGTFANQVGGYEHVTFSLRDMYNVVDKERRSKGTDSRAALAYLRSLKSYDPTMYWKHTVDKEGVNHHNQTTVFATTVVANEIEETYVWLLECLLEAMNDKMPKSVITDGDLAMKNAIRRVLPDSHHRLCA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02115 346 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 279 345 IPR031052 GO:0006355
Tsu06g02115 346 Pfam MULE transposase domain 279 345 IPR018289 -
Tsu06g02115 346 PANTHER OS02G0262500 PROTEIN 77 279 - -
Tsu06g02115 346 Pfam FAR1 DNA-binding domain 91 181 IPR004330 -
Tsu06g02115 346 PANTHER OS02G0262500 PROTEIN 279 345 - -
Tsu06g02115 346 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 279 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02115 Tsu-Chr6 26564365 26565645 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g02115 FAR1 9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02115 - - adu:107496430 262.692