Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02102 ATggctctctcttcttcttcatcttcattggTTGGGAAGGCAATCAAGCTTTCCCCGTCCACTCCAGATCTTGGGGTTGCAAGAGTCACAATGAGGAAAACAGCCACCAAGAAGAATGTTTCTTCTGGAAGTCCATGGTACGGTCCAGACCGTGTCAAGTATTTGGGTCCATTCTCCGGTGAAGCTCCATCATACCTCACTGGTGAATTTCCCGGTGATTATGGATGGGACACCGCTGGACTTTCTGCTGACCCCGAGACATTTGCCAAAAATCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGTGCCTTGGGATGTGTCTTCCCAGAGCTATTATCCCGCAATGGTGTCAAATTCGGCGAGGCTGTGTGGTTCAAGGCAGGATCTCAAATCTTTAGTGAGGGTGGACTTGACTACTTAGGCAACCCAAGCCTAGTGCATGCACAAAGTATCCTTGCTATTTGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCTGGAGGACCTCTCGGTGAAGTTGTTGACCCACTCTACCCCGGAGGCAGCTTCGACCCATTGGGCCTCGCTGAAGACCCAGAGGCATTCGCTGAATTGAAGgtactcagggtgatcgaggcaagcaagctgcagagtagtTAG 663 0.451 MALSSSSSSLVGKAIKLSPSTPDLGVARVTMRKTATKKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVLRVIEASKLQSS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02102 220 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 210 - -
Tsu06g02102 220 Gene3D Chlorophyll a/b binding protein domain 53 213 - -
Tsu06g02102 220 Pfam Chlorophyll A-B binding protein 62 208 IPR022796 -
Tsu06g02102 220 SUPERFAMILY Chlorophyll a-b binding protein 45 208 - -
Tsu06g02102 220 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 210 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02102 Tsu-Chr6 26373360 26376744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02102 1 208 Chloroplast and Mitochondria Gene Families AT1G29930 84.762 1.08e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02102 K08912 - gmx:100800351 388.652