Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02101 ATGGCTGCTTCATCAATggctctctcttcttcttcatcttcattggTTGGGAAGGCAATCAAGCTTTCCCCGTCCACTCCAGATCTTGGGGTTGCAAGAGTCACAATGAGGAAAACAGCCACCAAGAAGAATGTTTCTTCCGGAAGCCCGTGGTATGGTCCAGACCGTGTCAAGTATTTGGGTCCATTCTCTGGTGAAGCTCCATCTTATCTCACTGGTGAATTTCCCGGTGATTATGGATGGGACACCGCTGGACTTTCTGCTGACCCAGAGACATTTGCAAAAAACCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGTGCATTGGGATGTGTCTTCCCTGAGCTCTTATCCCGCAATGGTGTCAAATTCGGGGAGGCCGTGTGGTTCAAGGCAGGATCCCAAATCTTCAGCGAGGGTGGACTTGACTACCTGGGTAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCTATCTGGGCTGTCCAAGTTATCTTAATGGGAGTTGTTGAGGGTTACCGCATTGCTGGAGGACCTCTAGGTGATGTTGTCGATCCCCTTTACCCAGGTGGAAGCTTTGACCCATTAGGTCTAGCTGACGACCCTGAGGCTTTCGCGGAATTGAAGGTGAAGGAACTTAAGAATGGTAGGTTAGCTATGTTCTCTATGTTTGGATTCTTCGTTCAAGCTATTGTAACCGGAAAAGGACCTATAGAGAATCTTGCTGACCACCTTGCCGACCCTGTCAACAACAACGCTTGGGCCTTTGCCACAAACTTTGCCCCTGGAAAGTGA 804 0.4751 MAASSMALSSSSSSLVGKAIKLSPSTPDLGVARVTMRKTATKKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGVVEGYRIAGGPLGDVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFAPGK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02101 267 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Tsu06g02101 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Tsu06g02101 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
Tsu06g02101 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Tsu06g02101 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02101 Tsu-Chr6 26370248 26371644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02101 1 267 Chloroplast and Mitochondria Gene Families AT1G29930 86.617 2.03e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02101 K08912 - gmx:100800351 488.419