Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02100 ATGGctctctcttcttcctcttcttcattGGTTGGGAAGGCAATCAAGCTTTCTCCGTCCACTCCGGACCTTGGGGTGGCAAGAATCACAATGAGGAAAACAGCCACCAAGAAGAATGTTTCTTCAGGAAGTCCATGGTACGGTCCAGACCGTGTCAAGTACTTGGGTCCATTCTCTGGTGAAGCTCCATCATATCTTACTGGTGAATTTCCCGGTGACTATGGTTGGGACACTGCTGGACTTTCTGCCGACCCAGAGACATTTGCAAAAAACCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGTGCCTTGGGATGTGTCTTCCCTGAACTCTTATCCCGCAATGGTGTCAAATTCGGTGAGGCCGTGTGGTTCAAGGCAGGATCTCAAATCTTCAGTGAGGGTGGACTTGACTACCTGGGCAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCCATTTGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCCGGTGGACCTCTCGGGGAAGTTGTCGACCCGCTCTACCCCGGAGGTAGCTTCGACCCATTGGGCCTCGCTGAAGACCCCGAGGCTTTTGCAGAGTTAAAGGTGAAAGAACTCAAGAATGGTAGGTTAGCTATGTTCTCTATGTTTGGTTTCTTCGTTCAAGCTATTGTAACCGGTAAAGGACCTATAGAGAATCTTGCTGACCACCTTGCCGACCCTGTCAACAACAACGCTTGGGCCTTCGCCACAAATTTTGCCCCAGGAAAGTGA 789 0.488 MALSSSSSSLVGKAIKLSPSTPDLGVARITMRKTATKKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFAPGK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02100 262 Pfam Chlorophyll A-B binding protein 62 228 IPR022796 -
Tsu06g02100 262 SUPERFAMILY Chlorophyll a-b binding protein 45 259 - -
Tsu06g02100 262 Gene3D Chlorophyll a/b binding protein domain 53 255 - -
Tsu06g02100 262 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 262 - -
Tsu06g02100 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 262 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02100 Tsu-Chr6 26355756 26356801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02100 3 262 Chloroplast and Mitochondria Gene Families AT1G29930 86.641 1.87e-166 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02100 K08912 - gmx:100800351 489.574