Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02097 atggCTACTTCAACAATGGCTCTCTCTTCTCCATCATTTGTTGGGAAGGCAATCAAACTTACCCCTTCTACACAAGACCTAGGCATGGCAAGAGTAACCATGAGGAAAACAACCACCAAGAAGACGGTTCCTTCTGGAAGCCCGTGGTACGGTCCAGACCGTGTCAAGTACTTGGGTCCCTTCTCTGGTGAAGCTCCATCCTACCTCACTGGCGAGTTTCCTGGTGACTATGGTTGGGACACAGCTGGACTCTCTGCTGACCCAGAGACATTTGCCAAAAACCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGAGCCTTGGGATGTGTCTTCCCTGAGCTCTTGTCCCGCAATGGTGTTAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCCCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCCTAGTCCATGCACAAAGTATCCTTGCTATCTGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCTGGTGGACCTCTCGGTGAAGTTGTCGACCCACTCTACCCAGGTGGCAGCTTTGACCCATTAGGGCTAGCTGACGACCCAGAGGCTTTTGCTGAATTGAAGGTGAAGGAACTCAAGAATGGTAGGTTAGCTATGTTCTCTATGTTTGGATTCTTCGTGCAGGCTATTGTAACCGGAAAGGGACCTCTTGAAAACCTTGCTGACCACATCGCCGACCCTGTCAACAACAATGCTTGGGCCTTTGCCACAAACTTTGTCCCCGGAAAGTGA 798 0.5025 MATSTMALSSPSFVGKAIKLTPSTQDLGMARVTMRKTTTKKTVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02097 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Tsu06g02097 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 265 - -
Tsu06g02097 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Tsu06g02097 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Tsu06g02097 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02097 Tsu-Chr6 26344684 26345813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02097 1 265 Chloroplast and Mitochondria Gene Families AT1G29930 88.390 2.11e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02097 K08912 - twl:119999803 498.049