Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02096 ATGTCTCTCTCTTCTTCAACATTTATTGGGAAAGCCATCAAACTTTCCCCATCTCAGGACTTTGGAGTTGCAAGAGTCACAATGAGAAAAACAGTCACCAAGAAAGTTTCTTCTGGTAGTCCATGGTACGGTCCAGACCGTGTCAAGTACTTGGGTCCATTCTCTGGTGAAGCTCCATCATATCTCACTGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCTGGACTTTCAGCTGACCCGGAGACTTTTTCCAAAAATCGTGAACTCGAGGTCATCCACAGTAGATGGGCTATGTTGGGTGCCTTGGGATGTGTCTTCCCTGAGCTCTTGGCTCGCAATGGTGTTAAATTCGGGGAGGCTGTGTGGTTCAAGGCAGGATCCCAAATCTTTAGTGAAGGTGGACTTGACTACTTGGGTAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCTATTTGGGCTGTCCAAGTTATCTTAATGGGTGCTGTTGAGGGTTACCGCATTGCTGGTGGACCTCTTGGTGAGGTAGTCGACCCACTCTACCCAGGTGGCAGCTTTGACCCATTAGGCCTTGCCGATGATCCAGAGGCTTTTGCAGAGTTGAAGGTAAAAGAATTAAAGAATGGTAGATTAGCCATGTTCTCAATGTTCGGATTCTTTGTTCAGGCTATTGTAACTGGAAAAGGACCTATTGAGAACCTCGTTGATCACCTTGCTGATCCAGTTAACAACAACGCATGGGCTTATGCCACAAACTTTGCCCCGGGAAAGTGA 777 0.4723 MSLSSSTFIGKAIKLSPSQDFGVARVTMRKTVTKKVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVNNNAWAYATNFAPGK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02096 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Tsu06g02096 258 Pfam Chlorophyll A-B binding protein 58 224 IPR022796 -
Tsu06g02096 258 Gene3D Chlorophyll a/b binding protein domain 49 251 - -
Tsu06g02096 258 SUPERFAMILY Chlorophyll a-b binding protein 41 255 - -
Tsu06g02096 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02096 Tsu-Chr6 26331544 26332320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02096 1 258 Chloroplast and Mitochondria Gene Families AT1G29930 88.168 6.85e-167 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02096 K08912 - fve:101305728 490.345