Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02069 ATGGCTTTTCCACCTTCTCACACTTTCATTTTTCAAACTCATGAAGATCATCATCATGAAAACCTTCagtcatcttcatcttctctcaACTCTTTCCCTTCCTTTCCACCTCATCAACACTTTCAAGGTAGTGGCAACCATGGTGGTGCATCTTTCATGATGAAGAGATCCATGTCATTTTCAGGCATAGAGAACAATCACAACCACAATAACTACAACAACATGAACAATAAGTGTGATGAATTAATGCATGGAGATGAAGATCAATTATCAGATGATGAAGGTTACTCACAacttggtgaaaagaagaagaggTTGAGTTTGGAACAAGTGAAAGCACTTGAGAAGAGTTTTGAGATTGGAAACAAACTTGAACCTGAAAGGAAAATGCAATTGGCTAAAGCTTTGGGGTTACAACCTAGACAAGTAGCTATATGGTTTCAAAATAGAAGAGCAAGGTGGAAAACAAAGCAACTTGAGAAAGAATATGAAGTTCTTAAGAAGCAATTTGAATCTCTTAAGGCTGATAATGATTCCCTAAAGGCTCAAAATCATAAACTTCATGCAGAGCTACAAACTCTAAAGAATAGGGATTGCTTTGAAAATGGAACAATTGGccttaaaaaggaaaatgaatgtTGTTGGAGCAATGGAAGTGATAACAGTTCAGATATGAATCTAGACCATTCTAGAACACAAATAATGAATAGTCCTTTATCTTCACAGACTGGAAAAACTGTTCTACAAACTTCCCTTAAGCCTACAAGTATGACACAACTCCTTCAATGCTCATCAAGATCAGATCTTCAAGATGAAAGCTTTTGCAATATGTTTCCTAACATTGATGAGCAGCAGAGTTTATGGCCTTGGACTGATCATCAGCAGCAACACCATTTCCAATAA 903 0.3422 MAFPPSHTFIFQTHEDHHHENLQSSSSSLNSFPSFPPHQHFQGSGNHGGASFMMKRSMSFSGIENNHNHNNYNNMNNKCDELMHGDEDQLSDDEGYSQLGEKKKRLSLEQVKALEKSFEIGNKLEPERKMQLAKALGLQPRQVAIWFQNRRARWKTKQLEKEYEVLKKQFESLKADNDSLKAQNHKLHAELQTLKNRDCFENGTIGLKKENECCWSNGSDNSSDMNLDHSRTQIMNSPLSSQTGKTVLQTSLKPTSMTQLLQCSSRSDLQDESFCNMFPNIDEQQSLWPWTDHQQQHHFQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02069 300 Coils Coil 149 197 - -
Tsu06g02069 300 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 299 IPR045224 GO:0003700
Tsu06g02069 300 CDD homeodomain 102 158 IPR001356 GO:0003677
Tsu06g02069 300 PRINTS Lambda-repressor HTH signature 128 137 IPR000047 GO:0003677
Tsu06g02069 300 PRINTS Lambda-repressor HTH signature 137 153 IPR000047 GO:0003677
Tsu06g02069 300 SUPERFAMILY Homeodomain-like 91 159 IPR009057 -
Tsu06g02069 300 Pfam Homeobox associated leucine zipper 157 197 IPR003106 GO:0006355|GO:0043565
Tsu06g02069 300 Pfam Homeodomain 102 155 IPR001356 GO:0003677
Tsu06g02069 300 Gene3D - 95 172 - -
Tsu06g02069 300 ProSitePatterns 'Homeobox' domain signature. 132 155 IPR017970 GO:0000981|GO:0006355
Tsu06g02069 300 SMART HOX_1 100 161 IPR001356 GO:0003677
Tsu06g02069 300 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 299 - -
Tsu06g02069 300 ProSiteProfiles 'Homeobox' domain profile. 97 157 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02069 Tsu-Chr6 25786359 25789493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02069 1 292 Homeobox Transcription Factor Family AT5G15150 49.508 2.64e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tsu06g02069 Homeodomain 4.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02069 K09338 - gmx:100790803 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02069 06 25786359 25789493 Tsu06g02069 06 25786359 25789493 ECH