Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02067 ATGGCAGATTCAAGATTTTGGATGAAGTTCAAGCTTTTATTTAGCTGCATATCAATAGGCTCAGCTCAAGGAAATCACACAAAAAATGATGACAAGAATACTGTTGTTGGTACCCCAAAATCATCCACCTCAAGATCACCAACTCCAAGAGATATAAGTTATACTCGTAATTCTTATTTATACCAATTCACATATCACGATTTAAAGGTAGCAACAAAAAACTTCTTGCCAGAATTGTTTCTTGGTGAAGGAGGTTTTGGTTCTGTTTATAAAGGTTGGATAACTCCTAATAAGAGATCTAGAGTGGAGATTCCAATAGCAGTGAAAACTCTAAACAAAAATGGCTTACAAGGCCACAAAGAATGGGAGGCTGAAATTAACCATTTGGGAGCTCTCTCGCATCCCAATTTGGTCAAACTCATTGGTTATTGCATTGAAGGTGATCATAGAGTACTTGTTTATGAGTTTATGCTAAGAGGAAGTTTGGAAAATTATCTGTTTAAGAGACATACTACAAATCTCACATGGGCTGTTAGAATGAAAATTATGCTTGGTGCTGCAAAAGGTCTTGCATTTTTGCATGAAGAAGCTGAAAAGCCACTCATATATAGAGATTTCAAAACATCCAATATCTTATTAGATTCGGAATACAATGCCAAACTTTCTGATTTTGGGCTAGCTAAAGATGCTCCAGTGGGAGATAAAACTCATGTGTCAACTGAAGTGTTTGGAACTAAAGGCTATGTAGATCCTCACTATGTAATGACAGGACACCTTACATCCAAAAATGATGTCTACAGTTTTGGTGTGGTACTCCTTGAGATGTTAACAGGAAGAAAAGCAATTGACAAAAGAAGGCCAAAAGATGAACGAGTTTTGGTTGAATGGGTAAAACCATTCTTAAATCAATATGGAGAGTTCTTTCAAATAATGGATCCAAAACTTAAAGGCCAATACACAAAAAGAGCTGCTTATAAGGCCATAAAAATAGCTGCAAATTGTATTTATCTTGATCAAAAATCAAGACCGCTGATGAGCGAAATTGTTAAGGAGCTTAAGAATATCCTCGATTATAGTGACATGCCTGGTTCACCATTACCTCCACCACCATTATCATGTAAGGGATCGGATGCTGGCCCTTCCTCTAGTCATGGTGGCGGTGCTAACAAATATGATCTCAATGTTGGTACATCATCTTCGGCTATGTCTACTCCGAATCGGTTTCAAGGTTCGCCATTGAGGTTTACCCCTCCTTTTCTTTCACCAATTTCTCCTTATGGTGGAAATCCTTGA 1293 0.3759 MADSRFWMKFKLLFSCISIGSAQGNHTKNDDKNTVVGTPKSSTSRSPTPRDISYTRNSYLYQFTYHDLKVATKNFLPELFLGEGGFGSVYKGWITPNKRSRVEIPIAVKTLNKNGLQGHKEWEAEINHLGALSHPNLVKLIGYCIEGDHRVLVYEFMLRGSLENYLFKRHTTNLTWAVRMKIMLGAAKGLAFLHEEAEKPLIYRDFKTSNILLDSEYNAKLSDFGLAKDAPVGDKTHVSTEVFGTKGYVDPHYVMTGHLTSKNDVYSFGVVLLEMLTGRKAIDKRRPKDERVLVEWVKPFLNQYGEFFQIMDPKLKGQYTKRAAYKAIKIAANCIYLDQKSRPLMSEIVKELKNILDYSDMPGSPLPPPPLSCKGSDAGPSSSHGGGANKYDLNVGTSSSAMSTPNRFQGSPLRFTPPFLSPISPYGGNP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02067 430 MobiDBLite consensus disorder prediction 26 50 - -
Tsu06g02067 430 Pfam Protein tyrosine and serine/threonine kinase 81 352 IPR001245 GO:0004672|GO:0006468
Tsu06g02067 430 Gene3D Transferase(Phosphotransferase) domain 1 157 361 - -
Tsu06g02067 430 PANTHER TYROSINE KINASE FAMILY PROTEIN 38 401 - -
Tsu06g02067 430 SUPERFAMILY Protein kinase-like (PK-like) 43 351 IPR011009 -
Tsu06g02067 430 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Tsu06g02067 430 MobiDBLite consensus disorder prediction 366 430 - -
Tsu06g02067 430 PANTHER OS01G0588500 PROTEIN-RELATED 38 401 - -
Tsu06g02067 430 MobiDBLite consensus disorder prediction 392 411 - -
Tsu06g02067 430 Gene3D Phosphorylase Kinase; domain 1 36 156 - -
Tsu06g02067 430 ProSiteProfiles Protein kinase domain profile. 75 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02067 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02067 Tsu-Chr6 25741091 25745488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02067 24 352 Glycoside Hydrolase AT3G07070 48.795 5.81e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu06g02067 PK_Tyr_Ser-Thr 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02067 - - mtr:MTR_3g462840 517.694