Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02059 ATGGAAATGATAATAAAGACTGAAGAGAACAAGAGAAGGAAATTCATTTCCATGGCAGATGATGATTTTCAAGTAATTGGAAAGAGACGACGAAGAGAGCCAGCAGTAGCTGCACTTACTTCTGAGGATGACCAAGGTCAGAATCAACAAGTTTGTCAAAATTCTACTACTACCAGCACCACAAAGAGAAGTTCAAGATTTCGTGGTGTCAGCAGACATCGATGGACAGGTCGATATGAAGCTCACTTATGGGATAAACTCTCATGGAACATGACCCAAAAGAAGAAAGGGAAGCAAGGGGCTTACGATGACGAAATATCGGCAGCCAGAGCATATGATTTAGCTGCACTAAAGTACTGGGGAACATTGACTGTCACCAATTTTCCTGTCTCAGAGTATGAAGAACAACTAGAGATAATGCAAACTATGACAAAAGAGGAGTACTTGGCCACTTTAAGAAGAAAGAGCAGTGGCTTTTCAAGAGGGGCATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAACGGTAGATGGGAAGCACGGATCGGAAGGGTTTTTGGAAACAAGTATCTCTACCTCGGAACCTACAGCACCCAAGAAGAAGCTGCACGTGCTTATGACATAGCAGCCATTGAGTATAGAGGGAGCCATGCGATAACAAACTTCGACCTGAGTACTTACATGAGATGGTTAAAATCATCAGCAGGAAATATCTCAGAACCAAAACTTGAAAAACTGGAACTACCAGAGTCTCAGACAGTGGCATCCCGATCTAACTATTCCCCGGTAGAGGGGTCGAAATCCTTGGTCCTGCACAGCAGTACTTATAATAATCCAGATTATCTGAATTCCCCTCAAAAGTATGAAGTTTTTGACAATAACATCTCCAGCACTAAGTCGTCTTCTTCTCCAACTGCACTTGGGCTCCTTTTCCGGTCTACAATATTTAGAGAATTAGTTGAAAAGAATTCGAACATATCTAGAGATGAAACTGAAGGGGAAGACACAAAGGATCAACAGCCACAGACGGCAAGTGGTGTTAATGATGAGTTGGATGGGATATTCTACGATGGAACTGGGTTATCCCCTTACTGA 1095 0.4283 MEMIIKTEENKRRKFISMADDDFQVIGKRRRREPAVAALTSEDDQGQNQQVCQNSTTTSTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNMTQKKKGKQGAYDDEISAARAYDLAALKYWGTLTVTNFPVSEYEEQLEIMQTMTKEEYLATLRRKSSGFSRGASKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGSHAITNFDLSTYMRWLKSSAGNISEPKLEKLELPESQTVASRSNYSPVEGSKSLVLHSSTYNNPDYLNSPQKYEVFDNNISSTKSSSSPTALGLLFRSTIFRELVEKNSNISRDETEGEDTKDQQPQTASGVNDELDGIFYDGTGLSPY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02059 364 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 PRINTS Ethylene responsive element binding protein signature 205 225 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 357 - -
Tsu06g02059 364 SUPERFAMILY DNA-binding domain 65 131 IPR016177 GO:0003677
Tsu06g02059 364 MobiDBLite consensus disorder prediction 323 364 - -
Tsu06g02059 364 MobiDBLite consensus disorder prediction 323 337 - -
Tsu06g02059 364 CDD AP2 67 131 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 ProSiteProfiles AP2/ERF domain profile. 165 223 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 MobiDBLite consensus disorder prediction 38 64 - -
Tsu06g02059 364 MobiDBLite consensus disorder prediction 41 64 - -
Tsu06g02059 364 SMART rav1_2 165 229 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 Pfam AP2 domain 65 121 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 Pfam AP2 domain 164 215 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 CDD AP2 164 225 IPR001471 GO:0003700|GO:0006355
Tsu06g02059 364 SUPERFAMILY DNA-binding domain 164 225 IPR016177 GO:0003677
Tsu06g02059 364 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 357 - -
Tsu06g02059 364 Gene3D AP2/ERF domain 164 225 IPR036955 GO:0003700|GO:0006355
Tsu06g02059 364 Gene3D AP2/ERF domain 65 131 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02059 Tsu-Chr6 25649052 25651805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02059 62 277 AP2-EREBP Transcription Factor Family AT5G57390 59.091 1.43e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Tsu06g02059 AP2 3.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02059 - - ahf:112716370 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02059 06 25649052 25651805 Tsu06g02059 06 25649052 25651805 ECH