Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02034 ATGGGGTttagaaataaaaatgtaattaaagcAGGAAGTTTGAAAGTTGATAAGTCAAAGGATGATGATGTtgcaaagaaaaagagaagatgTTGTTTTAGATTCAGTTTTATTAGATGCTGTATACCTTCAAGATCAAATTTTGATAGCTCAATATGTTGCAATGGCACTACTAATACACAAATTGGTGATAAAGACAATACTAAGTCAGTAATAATTCAatcagaggaaaataaatctacatctgaaacaaacacaaagGAATCAAATGGTCTTGTAGATTCCTCTACAACAACTAGTAATGGGGAAAGTATCACTTCGACGTCAAAATTCAGTGAAGAATTGAAGGTTGCTTCTTGTTTAAGAAAATTCACATTCAATGGACTTAAGGTAGCAACTAGGAATTTCAGACCAGAAAGTCTTCTAGGTGAAGGAGGGTTTGGTTGTGTTTTCAAAGGTTGGATTGAAGAGAATGGAACTGCGCCCGTGAAACCGGGTACCGGACTTACAGTTGCTGTCAAGATCCTTAATCACAATGGACATCAAGGTCACAAAGAATGGCTTGCTGAATTAAACTATCTCGGCGATCTTGTACATCCTAATCTCGTTAAGTTAATAGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTACGAGTTTATGCCGCGAGGAAGTTTGGAGAATCACCTCTTCAGAAGGCCTTTGCCTCTACCATGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCTAAAGGTCTTGCTTTTCTCCATGAAGGAGCTCAAAGGCCCGTGATATATCGCGATTTCAAGACATCTAATATTCTATTAGATGCGGAATACAATGCGAAGCTTTCTGATTTTGGACTTGCCAAAGATGCTCCTGAGGGGGAAAAGACACATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCGGAATATGTGATGACGGgaCATTTATCATCGAAAAGTGATGTCTACAGTTTTGGAGTAGTACTACTCGAAATGCTCACCGGTCGACGAGCTATTGACAAGAAAAGACCAAAAGGAGAGCACAATCTGGTGGAGTGGGCAAGACCGGTACTTGGAGACAGGAGGATGTTCTACCGAATAATTGATCCCCGTCTTGAAGGTCACTTTTCAGTTAAAGGATCACAGAAAGCAGCACAGCTGGCTTCTCAATGCCTTAGCCGTGATCCAAAATCTAGACCTTTGATGAGCGAAATTGTGCAAGCTTTAAAGCCTTTGCCAAACCTTAAGGATATGGCCATATCATCTCATCAATTCAAGATTGCGCGTGTTGATCGTACCATGTCCATGCCGAATTCTAAAAACGGTATTAGAACTGATATAGTATCTTTACCAAAGGGTCAGCCAAAAAGGACCTTGTCGAGTTCACATTATGGACATGCTTCTCCATATCCGCGTCATAGCAAGTCTCCAAAACCTATTGCGTAA 1467 0.3817 MGFRNKNVIKAGSLKVDKSKDDDVAKKKRRCCFRFSFIRCCIPSRSNFDSSICCNGTTNTQIGDKDNTKSVIIQSEENKSTSETNTKESNGLVDSSTTTSNGESITSTSKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEGAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGEKTHVSTRVMGTYGYAAPEYVMTGHLSSKSDVYSFGVVLLEMLTGRRAIDKKRPKGEHNLVEWARPVLGDRRMFYRIIDPRLEGHFSVKGSQKAAQLASQCLSRDPKSRPLMSEIVQALKPLPNLKDMAISSHQFKIARVDRTMSMPNSKNGIRTDIVSLPKGQPKRTLSSSHYGHASPYPRHSKSPKPIA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02034 488 ProSitePatterns Protein kinases ATP-binding region signature. 142 174 IPR017441 GO:0005524
Tsu06g02034 488 Gene3D Phosphorylase Kinase; domain 1 120 221 - -
Tsu06g02034 488 PANTHER RECEPTOR-LIKE KINASE PLANT 66 480 - -
Tsu06g02034 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Tsu06g02034 488 Gene3D Transferase(Phosphotransferase) domain 1 222 440 - -
Tsu06g02034 488 PANTHER OS01G0588500 PROTEIN-RELATED 66 480 - -
Tsu06g02034 488 SUPERFAMILY Protein kinase-like (PK-like) 111 416 IPR011009 -
Tsu06g02034 488 Pfam Protein kinase domain 139 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02034 488 CDD STKc_IRAK 142 419 - -
Tsu06g02034 488 MobiDBLite consensus disorder prediction 75 105 - -
Tsu06g02034 488 ProSiteProfiles Protein kinase domain profile. 136 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02034 488 MobiDBLite consensus disorder prediction 443 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02034 Tsu-Chr6 25167984 25171645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02034 88 428 Glycoside Hydrolase AT3G07070 51.873 1.66e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu06g02034 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02034 - - gmx:100499647 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02034 06 25167984 25171645 Tsu04g00103 04 1002767 1006247 PCT