Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02003 ATGATTCACAAAACCATGTCTTCTTCATTCTCCTTTCTGTTCTTCACCATATTCACTTTCTGGGTATGTTTCACTTCATCTCAAGTTGAAGAAGACAGTGTAAAATGTCTCAAAGGTATACAACAAAACCTAGGAACCCCCGACAGTTCTATCTCAACATGGAGTTTCAACAACAAAACTGTCGGATTCATATGTGACTTTGTTGGTGTTACATGTTGGAATGTTAGAGAAAATCGTGTTTTGGGTTTAGAACTTAAAGGTATGAAACTTTCTGGTAAGATCCCAGAATCTTTGAAGTATTGTGGACAAAGTTTGCAAAAATTGGATCTTGGTTCAAATTCATTGACTTCAGTTATTCCAACACAGATCTGTGATTGGATGCCATTTTTGGTAACTATGGATTTATCAAGTAATGATCTTTCTGGTCCAATTCCTAATACTCTTGTTAATTGTTCATATTTGAATGAGTTAATTTTATCTGATAATCATCTTAGTGGTAGTATACCTTATGGAATTGGTAGTTTAACTCGTCTTCATAAGTTTAATGTTGCTAATAATCAACTTAGTGGTGATATTCCATCTTTTTTTAATGGTGTTGATAAGGAAGATTTTGATGGTAATAGTGGTTTATGTGGTGGTCCACTTGGATCAAAGTGTGGTGGTATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGTGTTTTTGGTGCTGCTGGTTCTTTGTTGTTGGCTTTTGGGTTATGGTGGTGGTATCATATTAGGTTGAGTGGGGATAGGAGGGGGAGGAGTAAGGAAGGGTATGTTGTCGGTGGGGTTGATGATTGGGCGGTTAGGTTGAGAGGTCATAAGCTTGCTCAAGTTAATCTTTTTCAGAAACCGATTGTTAAGGTTAAGCTTGGTGATTTGATGGCTGCAACGAATAATTTTAGTTCGGAGAATGTTCTTATTACGACTAGGACTGGGGCTACTTATAGGGCTGATTTACCGGATGGTTCGACGCTTGCGGTGAAGAGGTTGAGTAGTTGTAAGATTGGTGAGAAGCAGTTTCGGATGGAGATGAATCGGTTGGGACAAGTTAGGCATCCAAATTTGGCGCCTTTGTTGGGGTATTGTGTTGTGGAAGAGGAGAAGCTTTTGGTTTATAAGCATATGTCGAATGGGACGCTTTTTTCGTTGTTGCATAAGAATAGTGGTGCGTTGGATTGGTTGATGAGGTTTAGGATAGGGTTGGGTGCGGCTAGGGGACTTGCATGGTTGCATCATGGTTGTCATCCTCCGATTATACAACAGAATATTTGTTCTAATGTGATTCTTGTTGATGAAGAATTTGATGCTCGGATTATGGACTTTGGACTTGCCAGGCTTATGACGTCTGATGCCAATGGTAGTTTTGTGAACGGTGATTTGGGGGAACTCGGTTATATAGCTCCTGAGTATTCGAGTACAATGGTTGCTTCGTTGAAAGGGGATGTGTATGGATTCGGTGTTTTACTTTTGGAGTTGGTCACCGGGTACAAACCTCTCGAGATGAACCACGGCGATGAAGAATTTAAGGGTAACTTAGTGGATTGGGTTAATGTGCATTCTAGTTCTGGTAGACTTAAGGATTGCATCGATAAGGCGATATGTGGAAAAGGTAACGATGAGGAGATTCTGCAGTTTCTGAAAATCGCATCCAATTGTGTCATTACTCGCCCGAAAGATAGGTGGTCCATGTACCAAGTTTATCATTCATTGAAGGGAATATCTAAAGATCACAGTTTCTCCGAACAAGATGACGAATTTCCCTTGATCTTTGGTAAGCCGGAAAATGAGCCAGCTTAG 1827 0.3996 MIHKTMSSSFSFLFFTIFTFWVCFTSSQVEEDSVKCLKGIQQNLGTPDSSISTWSFNNKTVGFICDFVGVTCWNVRENRVLGLELKGMKLSGKIPESLKYCGQSLQKLDLGSNSLTSVIPTQICDWMPFLVTMDLSSNDLSGPIPNTLVNCSYLNELILSDNHLSGSIPYGIGSLTRLHKFNVANNQLSGDIPSFFNGVDKEDFDGNSGLCGGPLGSKCGGMSKKNLAIIIAAGVFGAAGSLLLAFGLWWWYHIRLSGDRRGRSKEGYVVGGVDDWAVRLRGHKLAQVNLFQKPIVKVKLGDLMAATNNFSSENVLITTRTGATYRADLPDGSTLAVKRLSSCKIGEKQFRMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLFSLLHKNSGALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARIMDFGLARLMTSDANGSFVNGDLGELGYIAPEYSSTMVASLKGDVYGFGVLLLELVTGYKPLEMNHGDEEFKGNLVDWVNVHSSSGRLKDCIDKAICGKGNDEEILQFLKIASNCVITRPKDRWSMYQVYHSLKGISKDHSFSEQDDEFPLIFGKPENEPA 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02003 608 Gene3D Phosphorylase Kinase; domain 1 272 384 - -
Tsu06g02003 608 SUPERFAMILY L domain-like 60 201 - -
Tsu06g02003 608 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Tsu06g02003 608 Pfam Protein tyrosine and serine/threonine kinase 332 518 IPR001245 GO:0004672|GO:0006468
Tsu06g02003 608 ProSiteProfiles Protein kinase domain profile. 310 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g02003 608 Gene3D Transferase(Phosphotransferase) domain 1 385 604 - -
Tsu06g02003 608 PANTHER RECEPTOR-LIKE PROTEIN 55 15 602 - -
Tsu06g02003 608 SUPERFAMILY Protein kinase-like (PK-like) 290 580 IPR011009 -
Tsu06g02003 608 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 602 - -
Tsu06g02003 608 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02003 Tsu-Chr6 24741853 24744153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02003 18 606 Receptor kinase-like Gene Family AT3G28450 63.149 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tsu06g02003 PK_Tyr_Ser-Thr 3.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02003 - - lang:109347314 929.858