Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01974 ATGGCCAAGGAATGTTTCACTACAAACGACATGGTTGTTTCATCTCGTCCCAAACTCGTTGCAACCGAACATTTAGCCTATAGAGGAGCCATGTTTGGATTTGCATCCTATGGTCCTTATTGGCGCCACCTACGCAAGATTGCAACATTAGAGATCCTCACCAATCGCCGAGTCGAACAATATCAACATGTTCGTGTATCAGAAGTTCAAACATCGATTAAAGAGCTTTTCAATGTTTGGTCTAGCAAAAAGAATGAGTCACATTCATCAAACTATGTGTTGGTGGATTTGAAGCAATGGTTTACACACTTAACATTTAATATGGTTCTTGGAATGGTTGTTGGGAAGAGATATTTTGGTGCAAAATCTATTGTTGAGGAAAAACAAGCTCAAAGAAGTGTGAAAGCTTTGAATAAGATGATGCATTTGTTTGGAGTAATCACAGTTGGAGATGTTATTCCTTGTTTAAAATGGTATGATTTTGGTGGCCATGTGAAGATGATGAATGAAACTTCTAAAGAATTAGACGAAATTGTAGGTGAATTGTTGAAGGAGCGTCGCCATAAAAGAACTTTAGGTGAAAAGGTTGATGGTCAAGATCAAGACATCATGGGTGCATTACTTTCATTGCTTGATGGAAGCACCATTGAAGGGTTTGATTGTGATACCATAATCAAAGCCACAATATtgACATTATTTATTGGAGGAAGTGACACAAGTAGTGTTACCCTTACATGGGCGTTATGTTTGTTATTGAAAAATCCTTTTGCAATGGAAAAAGCGAAAGAAGAACTTGACATCCAAGTTGGCAAAGATAGATGTGTAAGCGAGTCAGACATAGGTAAGTTGGTATACCTTCGAGCTATAGTCAAAGAAACACTAAAATTGTATCCACCAGCTCCTCTCGCTGCACCTCGTGAATTCACGGGGAATTGCACATTAGGTGGTTACAATGTTTTAAAGGGAACTCAATTAATTACAAATCTTTGGAAGATCCACACAGATCCTAGTGTTTGGTCAAATCCTTTAGAGTTCAAACCAGAAAGATTTCTTAACACTAATAAAGTTGTCGATTTTCGGGGTAATCATTTTGAACTACTGCCATTTGGAAGTGGAAGAAGGATTTGTCCAGGAATATCTTTTGCACTTCAAATGGTCCATTTCACTCTAGCTagttttttacaaatatataaaaaataa 1200 0.3708 MAKECFTTNDMVVSSRPKLVATEHLAYRGAMFGFASYGPYWRHLRKIATLEILTNRRVEQYQHVRVSEVQTSIKELFNVWSSKKNESHSSNYVLVDLKQWFTHLTFNMVLGMVVGKRYFGAKSIVEEKQAQRSVKALNKMMHLFGVITVGDVIPCLKWYDFGGHVKMMNETSKELDEIVGELLKERRHKRTLGEKVDGQDQDIMGALLSLLDGSTIEGFDCDTIIKATILTLFIGGSDTSSVTLTWALCLLLKNPFAMEKAKEELDIQVGKDRCVSESDIGKLVYLRAIVKETLKLYPPAPLAAPREFTGNCTLGGYNVLKGTQLITNLWKIHTDPSVWSNPLEFKPERFLNTNKVVDFRGNHFELLPFGSGRRICPGISFALQMVHFTLASFLQIYKK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01974 399 PRINTS P450 superfamily signature 288 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS P450 superfamily signature 235 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Tsu06g01974 399 PRINTS E-class P450 group I signature 104 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 287 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 224 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 244 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 328 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 Gene3D Cytochrome P450 1 398 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 PANTHER CYTOCHROME P450 82A2 1 396 - -
Tsu06g01974 399 PANTHER CYTOCHROME P450 82C3-RELATED 1 396 - -
Tsu06g01974 399 SUPERFAMILY Cytochrome P450 1 398 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01974 399 Pfam Cytochrome P450 2 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01974 Tsu-Chr6 24428919 24430246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01974 1 397 Cytochrome P450 AT4G31970 46.914 2.72e-130 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01974 - - gmx:100803451 556.599