Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01970 atgagAAATGTTCGAGTCCCAGAGCTTGAAAAGAGACCATCAACCAATTACATGGAGAAGTTGAAGCAAGATAGTTCTCCAAGCATGCACGGAATTGTGATTGATTGGCTTGTGGAGTTGAATGATAGGATACATACAATCGGTGGTGCCCTCTCTCACACATTTGAGCTGGAAGCAAAATCAAAGGATGTATTTTCCGGTGAACCAGCTGTCATCAAGTTCCGTGTCCCCACAAACATCACTTTACAGGAGGCATATTCAACTCCCATATTGCCATTAGATGTTCTTGCTGATAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGGTACGGACAATTACTTTATGCTCTTTGTAA 357 0.4174 MRNVRVPELEKRPSTNYMEKLKQDSSPSMHGIVIDWLVELNDRIHTIGGALSHTFELEAKSKDVFSGEPAVIKFRVPTNITLQEAYSTPILPLDVLADRPPEKKFEWAKVRTITLCSL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01970 118 Pfam Translocon-associated protein beta (TRAPB) 48 116 - -
Tsu06g01970 118 PANTHER TRANSLOCON-ASSOCIATED PROTEIN BETA (TRAPB) FAMILY PROTEIN 42 110 - -
Tsu06g01970 118 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 42 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01970 Tsu-Chr6 24383444 24385944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01970 3 57 Core Cell Cycle Gene Families AT5G25380 43.636 1.07e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01970 K13250 - gmx:100500066 119.398