Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01963 ATGGATTTAGTTCTAAGCAGCCTAATAAACACCACACCAATTGCCCTCCTAATATCTATAATTTCACTATTATTGTTTCTACTTGGATTCACAAAGTTTGCTCATAGCAAAAACAAAGAGGCACCAATAGCCAAAGGTGCATGGCCAATAGTTGGTCACCTCCCAATTTTTAGTGGCACACAACCACCCCATAGAGTATTAGGTACCTTAGCTGATAAATATGGACCAATATTCACCATCAAACTTGGTTCTAAACATGCTTTAATAATCAACAATTGGGAAATGGCCAAAGAATGTTTCACTACAAATGACATGGCCGTTTCGTCTCGCCCTAAGCTAGTTGCAACGGAACATTTGGCTTATAAAGGAGCCATGTTTGGCTTTGCACCCTATGGCCCTTATTGGCGCCAACTTCGCAAGATTGCAACTTTAGAGATCCTCTCAAATCGTCGAGttgaacaacaaaaacatattcaTATTTCTGAAGTTCGAACATCGATAAAAGAGCTTTGTGATGTTTGGTCTAGCAAAAAGAGCGAGTTAAGTTCATCAAACTATGTGTTGGTGGATATGAAGGAGTGGTTTACACACTTAACATTCAACATGGTTCTTCGAATGGTTGTTGGAAAGAGATATTTTGGTGCAAAAACTaatgttgaagaagaagaagctcaaagatgtgtAGAAGCTTTGAAGGAGTTGATGCATTTGTTTGGGATAATAACAGTGGGAGATGTTATTCCAAGTttgaaattgtttgattttggtgGTCATGTGAAGGCAATGAATGCAACTTCTAAGAGATTGGACAAAATTTTAGATGAATGGTTGAAGGAGCGCCGCCATAACAAAATATTGGGTGAAAAGGTTGATGGTCAAGAACAAGACATCTTGGATGTGTTACTTTCTTTGTTTGATGGAACAACTATTGAAGGGTTTGATTCTGATATCATAATCAAAGCCACAATATTgACATTATTTGCTGGAGGAACCGACACAAGTAGTGTTATCCTTATATGGGCACTATGTTTACTATTGAAAAATCCCCTTGTAATGGAAAAAGCAAAAGAAGAACTTGATATCCAAGTTGGTAAAGAGAGATGCGTCAACGAGTTAGATATAAGTAAGTTGGTATACATTCAAGCTATAGTAAAAGAAACATTAAGATTGTATCCACCGGGTCCTCTCTCAGGACCTCATGAATTTTCCGATAATTGCAATTTAGGTGGTTATCACGTTAAAAAGGGAACTCGATTAATCACAAATCTTTGGAAGATACATACAGATCCTAATGTTTGGCCAAATCCATTAGAATTCAAACCTGAAAGGTTTCTTACAACTCATAAAGATGTTGATTTTCGGGGTAATCATTTTGAGCTATTGCCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATATCATTAGGACTTCAAATGTTACATTTCTCTCTTGCTAGTTTTTTGCATTCCTTTGATATCTTAAACCCAACATCTGAACTTGTTGATATGACCGAAGAATTTGGATTAACAAACACCAAAGCTACTCCACTTGAGATTCTTGTTAAACCACGTTTATCTCTCAATTGTTACGAAATTGTGTAA 1602 0.3539 MDLVLSSLINTTPIALLISIISLLLFLLGFTKFAHSKNKEAPIAKGAWPIVGHLPIFSGTQPPHRVLGTLADKYGPIFTIKLGSKHALIINNWEMAKECFTTNDMAVSSRPKLVATEHLAYKGAMFGFAPYGPYWRQLRKIATLEILSNRRVEQQKHIHISEVRTSIKELCDVWSSKKSELSSSNYVLVDMKEWFTHLTFNMVLRMVVGKRYFGAKTNVEEEEAQRCVEALKELMHLFGIITVGDVIPSLKLFDFGGHVKAMNATSKRLDKILDEWLKERRHNKILGEKVDGQEQDILDVLLSLFDGTTIEGFDSDIIIKATILTLFAGGTDTSSVILIWALCLLLKNPLVMEKAKEELDIQVGKERCVNELDISKLVYIQAIVKETLRLYPPGPLSGPHEFSDNCNLGGYHVKKGTRLITNLWKIHTDPNVWPNPLEFKPERFLTTHKDVDFRGNHFELLPFGSGRRMCPGISLGLQMLHFSLASFLHSFDILNPTSELVDMTEEFGLTNTKATPLEILVKPRLSLNCYEIV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01963 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Tsu06g01963 533 Pfam Cytochrome P450 47 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 SUPERFAMILY Cytochrome P450 47 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 Gene3D Cytochrome P450 30 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01963 533 PANTHER CYTOCHROME P450 82A2 1 531 - -
Tsu06g01963 533 PANTHER CYTOCHROME P450 82C3-RELATED 1 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01963 Tsu-Chr6 24261254 24263974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01963 9 525 Cytochrome P450 AT4G31940 46.667 3.52e-173 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01963 - - gmx:100805047 720.694