Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01962 atggatttagtcCTAAACTACCTTAACACTGCAACCATAGCACTCATTGCTCTAATTTCcctctttttctttctatttcgtTTCTCCAAAGTTTCTCATACCAAAGAACCTCCTATAATTTCAGGATCATGGCCAATACTAGGCCACCTTCTACTAATGAGAACACAAACACCCCACAAAACCTTAGCTGCCTTAGTTGATAAATATGGACCCATATTTACAATCAAGCTTGGTGCTACAAATGCTTTGGTACTCAACAATTGGGAATTAGCCAAAGAATGTTTCACTAAGAACGACATGGTCGTTTCGTCGCGCCCAAAACCGGTCGCGGTTGAACTCATGTCGTACAATCAAGCTTTCATTGGTTGGGCACCTTACGGTGCATATTGGCGccaattaagaaaaattgttacCTTAGAGATTCTCTCAAGTCGTCGAGTTGAACTACTGAGCCACATTCGTGTCTCAGAACTTCAAACATCAATTAAAGAACTTGTTAAAGTTTGGTCTAATCAAGTGTCGGTACAAAGTACTGGTGGGTCTAATCTCGCTAGTACTAATGATTATGTATCGGTTGAATTGAAGAAATGGTTTGCACAATTGACAttaaatatggtactaagaATGGTTGTTGGGAAGAGATGTTTTGGTGAAATGGTTGATGAGAAAAATAAGGAAGAAGCAATAAGGTTTTTggataatataagagattttaTGCGTTTAATTGGGACATTTACCGTAGGAGATGGTGTTCCAATTTTAAGGTTCTTGGATTTGGGAGGTCATGAAAAGCAAATGAAAGAATGTGCAAAGAAATTTGATAAATTGTTGAGTGAGTGGTTAGAAGAGCATCGTGAAAAGAAGGTTTTAGGTAGTGATAAGGTTGTGGGAGAAAGAGACTTCTTGGATGCTATGCTTTTGGTGCTTAATGACAAACCCATTGAGGGTTTTGAGGCAGATACCGTAATCAAAGCCACAACATTGGAATTGATTATAGGAGGAAGTGACACAAGCGCAGGAACACTTACATGGGCAATGTGTCTACTATTGAAAAATCCCCATGTACtagaaaaagcaaaagaagaACTTAACACACAAATTGGAAAAGAGAGATGGGTAAAGGAATCCGATATAACTAACTTAGTGTATCTTCAAGCTATAATTAAAGAGACGCTAAGATTGTATCCACCCGCTCCATTTTCATCTCCCCGTGAATTCACCGAAGATTGTACAATAGGTGGATATCATATTAAGAAAGGAACTCGATTGATGCCAAATTTCTGGAAGATTCATAGAGATCCTAATGTTTGGTCAGATCCGTTAGAATTCAAACCTGAAAGATTTCTCACCACTCACAAAGATGTCGATGTTAGGGGTCAAAATTTCGAGTTATTACCATTTGGAAGTGGGAGAAGAATGTGTGCTGGAATGTCCCTTGGTTTGCGTATGCTTCATTATATTCTAGCTACTTTTTTGCATTCTTTTGAATTCTTGAATCCATCTCCAGAATCAATTGATGCGACTGAAGTTCTTGAATTTACTAGCACTAAAGCTACTCCACTTGAGATTTTGGTTAAGCCTGGTTTGTCTCTCAATTGTTATGAAactaagtaa 1614 0.36 MDLVLNYLNTATIALIALISLFFFLFRFSKVSHTKEPPIISGSWPILGHLLLMRTQTPHKTLAALVDKYGPIFTIKLGATNALVLNNWELAKECFTKNDMVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSSRRVELLSHIRVSELQTSIKELVKVWSNQVSVQSTGGSNLASTNDYVSVELKKWFAQLTLNMVLRMVVGKRCFGEMVDEKNKEEAIRFLDNIRDFMRLIGTFTVGDGVPILRFLDLGGHEKQMKECAKKFDKLLSEWLEEHREKKVLGSDKVVGERDFLDAMLLVLNDKPIEGFEADTVIKATTLELIIGGSDTSAGTLTWAMCLLLKNPHVLEKAKEELNTQIGKERWVKESDITNLVYLQAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNFWKIHRDPNVWSDPLEFKPERFLTTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLRMLHYILATFLHSFEFLNPSPESIDATEVLEFTSTKATPLEILVKPGLSLNCYETK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01962 537 PANTHER CYTOCHROME P450 82A3 1 536 - -
Tsu06g01962 537 Pfam Cytochrome P450 43 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 Gene3D Cytochrome P450 28 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 PANTHER CYTOCHROME P450 82C3-RELATED 1 536 - -
Tsu06g01962 537 ProSiteProfiles RGS domain profile. 202 238 IPR016137 -
Tsu06g01962 537 SUPERFAMILY Cytochrome P450 43 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01962 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01962 Tsu-Chr6 24249799 24252394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01962 8 527 Cytochrome P450 AT4G31940 46.692 9.02e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01962 - - gmx:100789386 702.975