Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01961 ATGGATTTAGATCTAAATTTCCAAATTGTCACAGCAATAGGATTTCTTTCTCTAATATTCTTAGTTTATTTATTCCATTTTCATCCTTCCAAAGATGTTAAAAAGGGTAGAGAACCTCCCATGGCCTCAGGTTCATGGCCTATACTAGGTCACCTCTTAGTATTAGGTGGTTCCAAAACACCTCATAAAACATTAGGCACCATGGCTAACAAATATGGACCCCTATTCACAATAAAACTTGGTACACAACGTGCTTTGGTGCTAAGCAATTGGGAAATGGCAAAAGAGTGTTACACTATAAATGATGCCGCTGTTTCGTCTCGTTCTAAACTTGTTGCAATTGAACATATAGCTTATAATCAAGCTAGCTTTGGATTTGCACCCTATGGTCCTTATTGGCGCGAAATGCGTAAAATTGTTAGTATGTTCCTTTCGAATCGTCGAATGGAACAACTAAGCCATGTTCGAGTTGCTGAAGTTAAAACTTCAATTAAAGAGCTTTTTCATGTTTGGgctagtaaaaaaaatgattctgGTTACTTGTTGGTAGAGATGAAGCAGTGGTTCACCCAATTGGTATTCAATATagTTTTCCAAACAATGGCTGGGAAGAGATATTTTGGTGACACAGCAGTGGTAAAGGAGAAAGAAGCAGAAAAAGTTGTAAAGGCTTTGAGGTATTTCATGCATATGTTAGGGGTATGTACAATGGCTGATGCTGTTCCTATTCTAAGATGGATGAAATTAGGAGTTAAAGCAATGAAAGAAACTGCCAAAGAATTGGACATAGTTTTAGATGAGTGGTTAGTGGAACATCATAAGATGAAGGGTTTGGTTGAAAAGGTTGAAAGTGACCAAGATTTTATGGACATGATGATTTCAATGCTTGATGGTGCCACAATCAATGGGTTTGATGCCGACACTATAAACAAAGCCACAACATTGGCATTAATATTGGGAGCAACTGATACAAGCACAGTTACCCTTACCTGGGTAATTTGTTTACTATTGAGAAATCCTCTTGTATTAAAAAAAGCTAAAGAAGAACTCAACATTCAAATTGGAGAAGAAAGATTCATAATTGAATCCGACATAAATAAGTTGGTATACCTTCAAGCAATAGTGAAAGAAACATTAAGGTTATATCCTCCAGGTCCTCTCTCGGCACCCCGTGAATTCACAGAAGATTGTAACTTAGGCGGTTATCATATCAAAAAGGGAACTCGACTAATCACAAATCTTTGGAAAATTCACACCGATCCAAGTATTTGGCCAGATCCATTAGAGTTCAAACCCGAAAGATTTCTTACCACTCATAAAGACATTGATGCCAAAGGTCAACATTTTGAGTTGTTACCATTTGGGAGTGGTAGAAGGATATGTCCAGGAATATCTTTTGGCCTTCATATGATTCATTTAACTTTGGCTAATTTTTTACATTCCTTTGAAATCTCAAATGGATCTAGTGAACCTGTTGATATGACTGAAAATCTTGGAATGACCAATGAAAAAGCTACACCACTTGAGATTTTGGTTAAACCACATTTTTCTTATAAGTATTATGAAACTATGTGA 1575 0.3606 MDLDLNFQIVTAIGFLSLIFLVYLFHFHPSKDVKKGREPPMASGSWPILGHLLVLGGSKTPHKTLGTMANKYGPLFTIKLGTQRALVLSNWEMAKECYTINDAAVSSRSKLVAIEHIAYNQASFGFAPYGPYWREMRKIVSMFLSNRRMEQLSHVRVAEVKTSIKELFHVWASKKNDSGYLLVEMKQWFTQLVFNIVFQTMAGKRYFGDTAVVKEKEAEKVVKALRYFMHMLGVCTMADAVPILRWMKLGVKAMKETAKELDIVLDEWLVEHHKMKGLVEKVESDQDFMDMMISMLDGATINGFDADTINKATTLALILGATDTSTVTLTWVICLLLRNPLVLKKAKEELNIQIGEERFIIESDINKLVYLQAIVKETLRLYPPGPLSAPREFTEDCNLGGYHIKKGTRLITNLWKIHTDPSIWPDPLEFKPERFLTTHKDIDAKGQHFELLPFGSGRRICPGISFGLHMIHLTLANFLHSFEISNGSSEPVDMTENLGMTNEKATPLEILVKPHFSYKYYETM 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01961 524 Pfam Cytochrome P450 42 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PANTHER CYTOCHROME P450 82A3 1 523 - -
Tsu06g01961 524 PANTHER CYTOCHROME P450 82C3-RELATED 1 523 - -
Tsu06g01961 524 Gene3D Cytochrome P450 26 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 SUPERFAMILY Cytochrome P450 45 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Tsu06g01961 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g01961 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01961 Tsu-Chr6 24205143 24207616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01961 40 521 Cytochrome P450 AT4G31940 46.951 1.78e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01961 - - gmx:100779366 682.945