Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01954 atggcaacaacaaaaacatcctcaacaaaatcaaaaacatcaacaacGTTGTTGCCATTGTTCTTAATCTTTTTAATTAACCTTAACCTCTCCGAATCAAAACTAACATTAGatttttacaaacaaacatGTCCACAATTTGATGAAATCATTCAACAAACAGTAACATCAAAACAGATCCAATCACCGACAACCGCCGCCGCCACACTCCGTCTCTTTCTTCACGACTGTCTCCTCCCTAACGGTTGCGACGCCTCCGTCCTCCTCTCTTCCACCCCTTTCAACAAAGCAGAACGCGACAACGACATTAACCTCTCACTTCCCGGCGATGCTTTCGACCTCATCGTACGTATCAAAACAGCACTGGAGCTTTCTTGTCCGAACACCGTTTCTTGCTCCGACATCCTCGTAACAGCAACACGTGATCTCTTAGTTATGCTTGGTGGTCCTCATTTCAATGTTTACCTCGGCCGTCGCGACGGCCGAAGTTCAGTTTCAACCGCCGTGAACAATTTTCTACCGAAACCAACTATGCCAATGTCGCAGATCATCGACATTTTCGCGAAAAGAGGGTTTACAGTTGAAGAAATGGTTGCTCTTTCTGGTGCTCATACAGTTGGATTCTCTCATTGTTCTGAAATTAGTGCTGATATATATAACAACTCTTCGAATTCGGGTAGTTATTCGTCTTATAATCCTCGATTTGTTGAAGGATTAAGAAAAGCTTGTGGTGATTATAAGAAGAATCCAACTTTATCTGTTTTTAATGATATTATGACACCAAATAAGTTTGATAATGTTTATTTTCAGAATTTGCCTAAAGGTTTAGGGGTTTTGAAATCTGATCATGGTTTGTTTAGTGATAATTTAACTAAACCTTTTGTGGAAAGATTTGCTGCGGATCAAGATAGATTCTTTAAGGTTTTTGCTAGTTCTATGCAGAAGCTTAGTCTTTTGGGTGTTATGACTGGTAGGAAAGGTGAGATTAGGAGAAGATGTGATCAGattaattga 1014 0.3787 MATTKTSSTKSKTSTTLLPLFLIFLINLNLSESKLTLDFYKQTCPQFDEIIQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINLSLPGDAFDLIVRIKTALELSCPNTVSCSDILVTATRDLLVMLGGPHFNVYLGRRDGRSSVSTAVNNFLPKPTMPMSQIIDIFAKRGFTVEEMVALSGAHTVGFSHCSEISADIYNNSSNSGSYSSYNPRFVEGLRKACGDYKKNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLFSDNLTKPFVERFAADQDRFFKVFASSMQKLSLLGVMTGRKGEIRRRCDQIN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01954 337 ProSiteProfiles Plant heme peroxidase family profile. 34 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Tsu06g01954 337 Gene3D - 38 337 - -
Tsu06g01954 337 PANTHER PEROXIDASE 31 15 337 - -
Tsu06g01954 337 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PANTHER - 15 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 CDD secretory_peroxidase 34 336 IPR033905 GO:0004601|GO:0042744
Tsu06g01954 337 Pfam Peroxidase 57 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu06g01954 337 Gene3D Peroxidase, domain 2 174 316 - -
Tsu06g01954 337 SUPERFAMILY Heme-dependent peroxidases 35 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01954 Tsu-Chr6 24104975 24106940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01954 31 337 Peroxidase AT5G40150 65.147 3.69e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01954 K00430 - gmx:100798144 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01954 06 24104975 24106940 Tsu06g01954 06 24104975 24106940 ECH