Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01928 ATGTATGGGTTCGGTGGTGAGAAGTGGAAACACAATCGGCACATGTGGCCTGTTGTTACTTCTAACGCGACCACTGTAGTCACCGTTTCTTCACCGTCTCAATTTATATGCAaaGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAACCACCCCAAGACTCACCTCCTTTTATTGGAATAATTCGCAAGTTAACATTCGATAAAGAAGAAAATCCAAGTTTAGAAGTGAATTGGTTTTACCGGCCTGCTGATTTGAAACTAAATAAAGGGATTGTAGTGGAAGCTGCACCAAACGAAGTATTCTACTCCTTTCACAAGGATGAGATACATGCTGCATCATTACTCCATCCTTGTAAAGTCGCATTTCTCCGTAAAAGTGTTGAACTACCTTCAGGGATATCCGCATTTGTTTGTAGACGAGTGTACGACATTGACAACAATTGTTTACGGTGGCTAACTGATAAAGACTATATTAATGAACAGCAGGAAGAAGTTTACAAGCTATTAGATAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACGTCAACACAGTCATTGAAATCTAGTTCTGATAACATTCAAAGTAGTTCTTCCTTTGGTGTACAGGGTAAgggaaaaaagagagaaagaggtGATCAGGGATCTGATTCATCCAAAAAAGAGCGCTTATTTAAGGTAGAAGATGGAGATTCTGGTCAATTTAGACCGGAGAGCATGCTAAGGTCTGAGATTGCTAAAATCACCGATAAAGGCGGGTTTGTGGACTTTGAAGGGGTTGAAAAATTTATACAGCTCATGCAACCTGACAGTGCTGATAAAAAAATCGATTTGGCTGGTCGAATAATGCTTGTTGATGTAATATCTCTCACGGAACGGAATGAATGTCTTGGCTGGTTCGTACAGCTCCGGGGTTTGCCTGTGTTAGATGAATGGCTGCAGGAAGTCCATAAGGGCAAAATTGGTGATGGCAATGTGGATAAGTCTGAAGAATTTTTGTTAGCTTTACTTCGTGCATTGGATAAGCTTCCTGTGAATCTTCATGCACTACAAACCTGTAATGTTGGAAAATCTGTTAATAATTTACGTAGCCACAGAAATTCTGAAATTCAGAGGAAAGCCAGGAGTTTGGTAGACACCTGGAAGAAGCGTGTTGAAGCTGAAATGAACATGACTGATTCAAAACCAGGTTCAACCCGTGCTGTTTCTTGGCCGGCAAAGCAATCACAATCAGATGTTTCTCACTCTGGTAATAGGAAAAGTGGAGGATCCTCGGAGCATGTTCCAAAGAGCTCTGCTATTCAACCTTCAACATCCAAAAATTCCCAATCTAAGCTTAATTCTGGTGAAGTAGTTTCGAAGTTCACTTCATCCCCTGGCTCAACTAAATCGATGACTGCCTCAGCATGCACCAACTCAAAAGATCAGAATGTTAAACTCATTGTTGGTGCAACAACATCAGATCTACCTCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAACAACAGCAGATCTTGTTCTAGTGAATATACGAAGACTATTGGTTCTTGCCGGGAAGATGCAAAGGGCTCCACAGCAGGGTCAATGAGTGTGGGCAAAGTTCATGGTGGTGCATCCCGGACTCGGAAGTCGAGTAATGGTGTACATGGTGCTGGTGTTGCTGTAGTTCAGAAGGATCATAGCTCTGCCAAGTTGAGAAATTCACCGTCTGATAAAATTTCCCCGACCCGAATGTCCCATGAAAAGCCATCTGATCAGCCCCTTACCGATCAAGGGCATAATCAGCGACTGATTGTCAGGTTGCCAAACACTGGTCGAAGTCCTTCAAGGGGAGCTAGCGGGGGCACTTTTGAAGAACCTGCAATTACATGTGGTAAAACATCACCTCCTTCCGACAAAAATGAGAATCAGGACAGGAGAGTTAAAGCTAAAACTGATTGTTTGCAGACCCATGTGTCAAATGTGATAAATGATGCACCCAATGATAATGAAACAACTTGTTGTGATGAAGCTAAGGGCTCTCCGCCAGTGGATGATCGGTGCAGGGCTAGTGAAGATGGGGATAAAGCAGCAGAAACGCCAAAAACAACCTGTTCTTCAACTGGATTTGTTTCCAGATCAGGGCATACTTATGATGCTTCTTTAAGCCCCATGAATGCGTTGGTCGAGAGCTGTGTGAAATTTTCGGAAGCAAGTTCCTCTGTTTCCCCGGGAGATGATGGGATGAATCTGCTTGCTTCCGTGGCTGCAGGAGAAATATCCAGATCTGAAAATGTCTCACCTCTGCCTTCACCTGAGAGGAAGTCTCCTGCAGCTGATGAATCAAGCACAGGGAATGATTCCAAATTAAGACGTTCTTTTGAAGCAGCTGCTCGTACTATTGGACAGTCTGATGGTGGGGCTACTGGAGAACATCCTCGGAATAATGTGGAGTCATTGCAATTCAAGAATGATTCTAGGCATCCTGTGACGACAATATCACGTGATGTTTCAGATGGTGAAGCCATTTCATCTAGTCGTCTGGAGAAAACTGGTGATGGCAGAACTCAAATAAATTTCTCTTCAGATGCGATACAGACTGTTGAAGGTCCGTGCTTACGGCCTGACATCAAAGAGGATACTTCTGAAGCTATGTTTCCAGCTAGAAAGGAGACTCATGCAGAAACTGGAGGAGCAGAGCGTTTTCAGGAGCAGAGGGAATTGGGAACTCAATGGGCTAAAAACAGCAGTAGTTCAGGCTTTAAATTAAAGTCAAAGACTTCCTCTTTTGATGATGATCAGAAGATTGCTAACATGGATGGTGGCACCGTGGAGCACGAGAATGGAAATGAACAAGGGAAAAAATCCCCCGGGTTATCTTCAGGTGTAGATAGTAAGAGCCAGAACAGTGCAGATAAAGTCACAGGTATTCTTAGGCCTGTACAGAAAGGCTCTCCAGCTACAGATACATGCGAGTCCATGGATTTAAAAAGGGAGGATGTCCTGCCACCTGCCCCTGGTAATGCTTTGTCGGTATCCAGGGATGATAATGCTAATCATGTGACGCCAGTTGAGATTGAGCCTGATGTAAAACGAATGGATCTGGATTCAGCAGTTGCAGATGGTGTTGATGAATTTACTCAAGAGAATTTTAGTAGAAAAGAGGTTATTGGCTCTGGTTCATCAGTTCTCCCGGATTTACCAATTATTTCTGAGAAAGAGAACGAAGTGCCCAAAACATGTGATTctaatttagaaagaaaaaaatctgtAGATGCTGCAGAGTTGAATGCAGGCAATGCTATTCCATCCCCAATTGCTAGCGGTTCTGATGCAGGTGTAAAACTGGACTTTGATTTAAATGAGGGATACCCTGTTGAAGATGTAGGCCAAGCGGACATTGTTAGAACAGAAGAACCTACCAGTTCATCTGCAGTTCATGTTCCTTGCCCATTGCCTTTTCCCATTCCGTCCATCTCTGGTTCCTTCCATGCTTCAATTACAGTGGCTTCTGCTGCCAAAGGGCCGGTTGTTCCACCAGAAAATCCATTGCGGAGTAAGGGGGAACTTGGATGGAAAGGCTCTGCTGCTACAAGTGCATTCCGACCAGCTGAGCCTAGGAAAAATGCTGAGATGCCATCAAATACTGTTGATATTCCTTCCGTTGGCGCCACTTCAGTTAAAAAAGGCCGCGCTCCTTTAGATTTTGATTTAAATGTTGCAGATGAAGTAAGTTTCGACGACGGAGCTTACCGGGGTGCCTTAGAGTCTGGAACACATGACCGCAACACTGTGGGTCTTGATCTTGATCTAAACAGGTTAGATGAAACTCCTGAAGTTGGATCTTTCTCTATGGGTAAAGTGGATATTCCTTCTCTACCATGTAAACAACCTTCATTGTCCAGTGGGTTATCTAATGGTGGAAGTGTCTCAAGAgactttgatttaaataatgggCCAGGCCTCGATGAAGTTAGTACTGAAGTCCCAGCCCGTAGTCTGCAAATGAAAAGTACTGTGCCTTTTTCAAGTTCTGTTCATGGTTCGAGAACAACTAATGCTGAATTTGGGAATTATTCTTCATGGTTTCCTCCGGGCAGTTCGTATTCTGCAATTACTGTCCCGCCACTTCTGCCTGGTAGGGGGGAGCAGAGTTATGTTGGTGGTTCTGGAGCACAGCGGATCATAGGCTCCACTGGTAGCACACCTTTTAATCCTGAAATGTACAGAGGACCAGTACTTTCATCTTCTCCAGCTATTGCATATCCACCCACTACCCCGTTTCCATATCCAGGATTTCCATTTGAAACAAATTTTCCATTATCTTCAAACACTTTTTCTGGTTGTTCAACGCCGTTTATGGATTCATCAAATGTTGGCGGACTTTGCTTTCCTACTATGCCCTCACAGCCGGTTGGGCCTGGTGGTGTTGTCTCGTCTGCATATCCCCGTCCCTATGTTATGAGTCTCCCAGGTGGTACAAGTAATGTAATTCCTGACAGCAGAAAATGGGGAAGTCAGAGTCTGGATCTAAATTCAGGCCCTGGTGGTGCAGATGCGGAGCGCAGAGATGACAGATTGCCTTCAGGATTGAGACAGATGCCTGTCCCCACACAAGCCTTGATGGAGGATCACTTGAAGATGTTTCAGATGGCCGGTGCATTAAAAAGAAAGGAACCCGACGGTGGTTGGGATGGAACTGATAGATTCAGTTACAAACATCCCCCATGGCAGCAGTAG 4782 0.4385 MYGFGGEKWKHNRHMWPVVTSNATTVVTVSSPSQFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTFDKEENPSLEVNWFYRPADLKLNKGIVVEAAPNEVFYSFHKDEIHAASLLHPCKVAFLRKSVELPSGISAFVCRRVYDIDNNCLRWLTDKDYINEQQEEVYKLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSSSDNIQSSSSFGVQGKGKKRERGDQGSDSSKKERLFKVEDGDSGQFRPESMLRSEIAKITDKGGFVDFEGVEKFIQLMQPDSADKKIDLAGRIMLVDVISLTERNECLGWFVQLRGLPVLDEWLQEVHKGKIGDGNVDKSEEFLLALLRALDKLPVNLHALQTCNVGKSVNNLRSHRNSEIQRKARSLVDTWKKRVEAEMNMTDSKPGSTRAVSWPAKQSQSDVSHSGNRKSGGSSEHVPKSSAIQPSTSKNSQSKLNSGEVVSKFTSSPGSTKSMTASACTNSKDQNVKLIVGATTSDLPLTPIKEERSSSSSQSQNNSRSCSSEYTKTIGSCREDAKGSTAGSMSVGKVHGGASRTRKSSNGVHGAGVAVVQKDHSSAKLRNSPSDKISPTRMSHEKPSDQPLTDQGHNQRLIVRLPNTGRSPSRGASGGTFEEPAITCGKTSPPSDKNENQDRRVKAKTDCLQTHVSNVINDAPNDNETTCCDEAKGSPPVDDRCRASEDGDKAAETPKTTCSSTGFVSRSGHTYDASLSPMNALVESCVKFSEASSSVSPGDDGMNLLASVAAGEISRSENVSPLPSPERKSPAADESSTGNDSKLRRSFEAAARTIGQSDGGATGEHPRNNVESLQFKNDSRHPVTTISRDVSDGEAISSSRLEKTGDGRTQINFSSDAIQTVEGPCLRPDIKEDTSEAMFPARKETHAETGGAERFQEQRELGTQWAKNSSSSGFKLKSKTSSFDDDQKIANMDGGTVEHENGNEQGKKSPGLSSGVDSKSQNSADKVTGILRPVQKGSPATDTCESMDLKREDVLPPAPGNALSVSRDDNANHVTPVEIEPDVKRMDLDSAVADGVDEFTQENFSRKEVIGSGSSVLPDLPIISEKENEVPKTCDSNLERKKSVDAAELNAGNAIPSPIASGSDAGVKLDFDLNEGYPVEDVGQADIVRTEEPTSSSAVHVPCPLPFPIPSISGSFHASITVASAAKGPVVPPENPLRSKGELGWKGSAATSAFRPAEPRKNAEMPSNTVDIPSVGATSVKKGRAPLDFDLNVADEVSFDDGAYRGALESGTHDRNTVGLDLDLNRLDETPEVGSFSMGKVDIPSLPCKQPSLSSGLSNGGSVSRDFDLNNGPGLDEVSTEVPARSLQMKSTVPFSSSVHGSRTTNAEFGNYSSWFPPGSSYSAITVPPLLPGRGEQSYVGGSGAQRIIGSTGSTPFNPEMYRGPVLSSSPAIAYPPTTPFPYPGFPFETNFPLSSNTFSGCSTPFMDSSNVGGLCFPTMPSQPVGPGGVVSSAYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGGADAERRDDRLPSGLRQMPVPTQALMEDHLKMFQMAGALKRKEPDGGWDGTDRFSYKHPPWQQ 1593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 407 485 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 967 989 - -
Tsu06g01928 1593 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1592 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 690 722 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 402 485 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 775 803 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 180 251 - -
Tsu06g01928 1593 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 413 IPR035441 -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 694 713 - -
Tsu06g01928 1593 SMART TFS2_5 328 402 IPR003617 GO:0005634
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 1188 1231 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 1571 1593 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 507 535 - -
Tsu06g01928 1593 ProSiteProfiles BAH domain profile. 41 156 IPR001025 GO:0003682
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 609 632 - -
Tsu06g01928 1593 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1592 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 1515 1546 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 190 218 - -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 219 250 - -
Tsu06g01928 1593 Pfam BAH domain 42 147 IPR001025 GO:0003682
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 925 989 - -
Tsu06g01928 1593 ProSiteProfiles TFIIS N-terminal domain profile. 322 403 IPR017923 -
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 504 663 - -
Tsu06g01928 1593 Gene3D - 25 249 IPR043151 -
Tsu06g01928 1593 CDD TFIIS_I 332 401 - -
Tsu06g01928 1593 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 275 404 IPR035441 -
Tsu06g01928 1593 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Tsu06g01928 1593 SMART BAH_4 41 156 IPR001025 GO:0003682
Tsu06g01928 1593 MobiDBLite consensus disorder prediction 925 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01928 Tsu-Chr6 23715345 23722962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01928 275 398 Homeobox Transcription Factor Family AT4G02560 27.559 9.95e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Tsu06g01928 BAH 8.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01928 - - gmx:112998769 2234.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01928 06 23715345 23722962 Tsu06g01928 06 23715345 23722962 ECH