Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01926 ATGTCTTCTTCTTCCGACGAAGGTTACGCAATCGAACTTTACATGGATCCAGCACTTGAAAATCAAGTTCTCAAAGCATGGAACGTTCTCGCTCGCCGTCAAATCAGTACCGAATTAATCGAAATCGGTTCACGACCACACATCACACTCTTTTCAACTCCTTACCTTCTCGAACCTTCCAAACTTGAATCTATtctcaaaaccctaacttctaaATTCGatccattttctctttctttctcttcaatCTCTTCTTTTTCTAATGATAACAATACTCTATTTCTCTCACCTACTCCTTCTATCAATCTTCTCAATTTTCATTCCAATTTGATTGATTCGATTGTTAAAGAAGGAATTGAAGTTTCTGATGAATTTTTGATTGGAAATTGGATTCCTCATTGTGAAGTTGCGAATCATGTTCCTAAATTGAGAATTGCTGAAGCTTTTACTCTTCTTAGAGATCTTAAATTGCCTGTTACTGGTTATGCTGTTGATGTTGCTCTTGTTCAATTCAATCCGGTTCGTGAGATTTTCTCCTTTGTGCTTgTTTTCAAGTATCTATCTCCTGCTGTAGACATTTCAGCTATGGTTTTGCATAGTGTTCTGTTTAATTCATGTTATCGTGGTGTGATCCTAGCTTAG 642 0.3427 MSSSSDEGYAIELYMDPALENQVLKAWNVLARRQISTELIEIGSRPHITLFSTPYLLEPSKLESILKTLTSKFDPFSLSFSSISSFSNDNNTLFLSPTPSINLLNFHSNLIDSIVKEGIEVSDEFLIGNWIPHCEVANHVPKLRIAEAFTLLRDLKLPVTGYAVDVALVQFNPVREIFSFVLVFKYLSPAVDISAMVLHSVLFNSCYRGVILA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01926 213 PANTHER - 7 182 - -
Tsu06g01926 213 Pfam 2'-5' RNA ligase superfamily 45 170 - -
Tsu06g01926 213 Gene3D Cyclic phosphodiesterase 9 182 - -
Tsu06g01926 213 SUPERFAMILY LigT-like 2 151 IPR009097 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01926 7 182 Calmodulin-binding Proteins AT5G40190 61.364 4.41e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01926 - - mtr:MTR_6g007773 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01926 06 23680852 23683069 Tsu06g01926 06 23680852 23683069 ECH