Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01923 ATGCACAAAGTTTATAAAAAGGACACATGTGCAGTCTCTAAGGTTTTACCGGTTGTATGTaagccaccaccaccaccaaatCCTCTTCTCTTTTCACGTTTTGTAGTTGAAGCCACCACCGCCACCGCTATTTTGCTTTCCACCAAACCACGGCCGCTACTTCGATCCTCCACGTCGACCTGTGATGGATCAATTTCCGGCGGAGGATCTGATTTAACAGCGTCATCTCCCGGTTCCGATCCTTCACTTTTTGCAGCACACTATTTCCAATCTGAATGGAGCAGGAAAATGGATTTTAAGGAAATTCTGGATATTTTTGAAGTTGCACATGTAAGTCAGATCGGTGGAGAAGGTTCAGAGGCTTTGGGTAGTAGTTCTTGTTCGGAGAATGTTGAATGTTCCTCAGACGAAGATGTGGAAGACACTGACAATCTGTACTGTGGAAGCAACTTTGATGCTGAAACAGCAGTGGATTGTATGGATGActtagagaaaataaatatgaaggAAACCAGTTCGGATGAACTTATGAGGTACCATTTTCCTGATCGTAGTGTTGCATTTATGTTTTACAATTGCTATGGTCGTTTCCATGGATTCAGCGGTAGAAAAAGTCGAGTTTTTAAGAATGCTCATGGCGAAGTTGTTCAACAAACCTTTGTTTTCCATAGAGAAGGTATTAGGGatgcaaaaaataatttgtctCATAAGAGAGAGCGAAAACCTACTACTAGGTGTCATTGTCCAGCAAAACTTCAAGTACATTTGGACTTGGGTAGCGAACGTTGGTACATAAAGTTGTTTGATGATATTCATAATCATTCGTTCTTGGATGAGAAGTACGAGGGTATGCTACCAGCACACAGGAAGATGAGTGATTACGACAAATACCAAATGAAAACAATGAGGAAAGCTGGCATTCCAACGTCAGgtatttatgagttttttgcTACACAGGCTGGTGGATATGAAAATTTAGGTTATTCAAGAAGAGATATGTACAACGAACAATTCAAGCACAGGGGAAGAAATAGTTCTGATGCAGAGGATGCAATTGATTTCCTTAAGGATATGTGTGTTAGGGATGATATGATGTATTGGAGGCACACCATCAATGAGGATGGAACCCTTCGTCATTTGTTTTGGTGTGATGGGATTAGCCGTATGGACTACTCGGTGTTTGGTGATGTATTGGCATTTGATGCGACATATAGAAAAATTAGATATAATACACCGCTAGTTATTTTTTCTGGCGTAAACCATCATAATCAGAGTATCATATTCGGTAGTGCAATTGTCAGTGATGAAACCGAAGAAACTTATGTGTGGCTTTTGCAAAATTTGGTTGAAGCAATGGAAGGAAAATTACCGGTGTCTGTTATAACTGATGGTGATTTGGCTATGCGTAATGCAATTAGAAGAGTCTTTCCACAAGCTCACCATCGTTTGTGTGCTTGGCATTTGATAAGAAATGTTTCCAGCAATATAAAAGATCTAAGATTTGTACCAAAGTTCAAACAATGTATGTTTGCTGATGTTGATATTGATGAGTTTGATTGTAAGTGGAAGGCGTTGGTGGCTGAATTTCATTTGGAAGATAATAACTGGATTCATGAGATGTATGAAAAGCGAAATATGTGGTCAACCGCTCATATCCGTGGTAGCTTTTTTGCAGGATTTAGGACAACGTCTAGGTGTGAAGtttatttaaacATTGTTGTGTTGCCTGAATGTCTTGTACTTGAGAGATGGACGAAATGTGCTAAAGATGCAATAAATGCTAGTAATGCAAACAGTTCAAGCCACCGGGATCCTGCATTTATACCTACTTATGTTATGTTTGTGGAGCGGTGTAAGCGGATGGTTAAAGCTGCATTCGACTGTGGGAAACTTGAAGATATTCGTAGCACCATTGAAATGGTTGAAAAACACACAATTGTGTTGGAAGCAATTGGAAAGGGTGAATCTGATGACATGCATTCGTTTGGACTACAAACTGGAAGAAGTGTAGAGTTCAATGCACAATCACAAACTCATTCGGAAAATAACGGTAACTATGTGGATGATGAGTTTTTCGAAGATAACAATGATTGGAACCTGTCTATGGATTTGAGTTAA 2118 0.3824 MHKVYKKDTCAVSKVLPVVCKPPPPPNPLLFSRFVVEATTATAILLSTKPRPLLRSSTSTCDGSISGGGSDLTASSPGSDPSLFAAHYFQSEWSRKMDFKEILDIFEVAHVSQIGGEGSEALGSSSCSENVECSSDEDVEDTDNLYCGSNFDAETAVDCMDDLEKINMKETSSDELMRYHFPDRSVAFMFYNCYGRFHGFSGRKSRVFKNAHGEVVQQTFVFHREGIRDAKNNLSHKRERKPTTRCHCPAKLQVHLDLGSERWYIKLFDDIHNHSFLDEKYEGMLPAHRKMSDYDKYQMKTMRKAGIPTSGIYEFFATQAGGYENLGYSRRDMYNEQFKHRGRNSSDAEDAIDFLKDMCVRDDMMYWRHTINEDGTLRHLFWCDGISRMDYSVFGDVLAFDATYRKIRYNTPLVIFSGVNHHNQSIIFGSAIVSDETEETYVWLLQNLVEAMEGKLPVSVITDGDLAMRNAIRRVFPQAHHRLCAWHLIRNVSSNIKDLRFVPKFKQCMFADVDIDEFDCKWKALVAEFHLEDNNWIHEMYEKRNMWSTAHIRGSFFAGFRTTSRCEVYLNIVVLPECLVLERWTKCAKDAINASNANSSSHRDPAFIPTYVMFVERCKRMVKAAFDCGKLEDIRSTIEMVEKHTIVLEAIGKGESDDMHSFGLQTGRSVEFNAQSQTHSENNGNYVDDEFFEDNNDWNLSMDLS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01923 705 PANTHER OS02G0262500 PROTEIN 176 568 - -
Tsu06g01923 705 Pfam FAR1 DNA-binding domain 190 276 IPR004330 -
Tsu06g01923 705 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 176 568 IPR031052 GO:0006355
Tsu06g01923 705 MobiDBLite consensus disorder prediction 54 76 - -
Tsu06g01923 705 Pfam MULE transposase domain 397 491 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01923 Tsu-Chr6 23654845 23658874 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g01923 MULE 1e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01923 - - adu:110280242 454.907