Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01922 ATGGGTCTTGATATAGGTGTTGAGCAATGGAGTTTGGGTGTCAATCGGAGAATAATGTTGTCGTTGAGGATTCGGGTTCTGCAGATCTCGATAATGGGTCATTTGACAACNGACGAATACAGTAACAATGTTGGTGAAATAGGATGTGAAGTTGATGATGAAATTAGTGATAACGGGGAAGGCAGTGAGTTTGATGAAGAATTTGACATGTCGTCGGGTGATGGGAATGAACCACGGGATTGTGATGCGGAACGCATAAGCATAAATTGCATGGCGGATATTTGTAAGATTGATATGAACAATATATCGGCAGACGAAGTGGAAAGGTACGATTTTGCTGATTTGGAGATTGCGTACCAATTCTACTTCTGGTATGGAAGAGCAACTGGATTTTCTGTTCGTAAGAGTCATGTTGTGAGGGATCATGCCGGTGAAATTCTTCAGCAAACCTTTTTGTGCTCGCGTGCAGGATACAGAGAAAATAGGGGATTAACACCAGAGAAACGGAAGCGTGAGCCAAAAAATCAAACTAGGTGCGGATGTGAAGCCAAATTCAGAGTCCACATAGACATTGTTACAAGGCGTTGGTACGTTAAAATATTCGAATTTGATCATAACCATGTCTTGTTAGATGGAATGATGTGTGGTTTGTTACCGGCACATAGAAAGATGATGAAGACGGATGTACAAGATATTGAGAGTCATGGAATTGTTGGGATAAGACCATATCAAATGTATGGCGCAATGGCTAATTCAGCTGGGGGTTTCCACAAGGTTGGGTTTGTGAAAAAAGATTTATACAACCAGGTAAGCAGACAAAGGAAATTAATAACGTCTGATGCTAGTGCTGCTGTGAAATATCTTCGTGATCTTGGAAAGAAAGACCAACTGATGTTTGTTACCCACTCTGTTGACAAAGATAATAGGCTAGAACGACTTTTTTGGTGCGATGGAGAAAGCaggatgaactttgaagttTTTGGTGATGTTTTAGCCTTTGATGCCACTTACCGGAAGAACAAATACAATTGCCCGTTTGTTGTTTTTTCCGGTGTAAATCATCACAATCAAACCATAGTTTTTGCAACTGGTCTTGTAACAAGGGAGACTGAAGAGACGTATGTTTGGTTGCTAGAGCAGTTTGTGTGTGCAATGAAAGGCAAAACTCCAATATCTGTATATAAAAgtaaggtattagcaccctaa 1206 0.393 MGLDIGVEQWSLGVNRRIMLSLRIRVLQISIMGHLTXDEYSNNVGEIGCEVDDEISDNGEGSEFDEEFDMSSGDGNEPRDCDAERISINCMADICKIDMNNISADEVERYDFADLEIAYQFYFWYGRATGFSVRKSHVVRDHAGEILQQTFLCSRAGYRENRGLTPEKRKREPKNQTRCGCEAKFRVHIDIVTRRWYVKIFEFDHNHVLLDGMMCGLLPAHRKMMKTDVQDIESHGIVGIRPYQMYGAMANSAGGFHKVGFVKKDLYNQVSRQRKLITSDASAAVKYLRDLGKKDQLMFVTHSVDKDNRLERLFWCDGESRMNFEVFGDVLAFDATYRKNKYNCPFVVFSGVNHHNQTIVFATGLVTRETEETYVWLLEQFVCAMKGKTPISVYKSKVLAP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01922 401 MobiDBLite consensus disorder prediction 54 78 - -
Tsu06g01922 401 Pfam MULE transposase domain 330 388 IPR018289 -
Tsu06g01922 401 MobiDBLite consensus disorder prediction 54 71 - -
Tsu06g01922 401 Pfam FAR1 DNA-binding domain 120 210 IPR004330 -
Tsu06g01922 401 PANTHER OS02G0262500 PROTEIN 111 393 - -
Tsu06g01922 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 111 393 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01922 Tsu-Chr6 23650668 23652388 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu06g01922 FAR1 3.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01922 - - gmx:102662272 379.793