Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01911 ATGGATCTTGAGTCTGTGATTCACAAAAACCCAATTAAGGAAGAATCATGGAAGCATGTGTTGGTTTTAGCTTATCAAAGTTTAGGAGTTGTGTATGGAGATTTAAGCACTTCACCACTTTATGTTTACAAAAGCACTTTTGCTGAAGATATTAAACATTCAGATACAAATGAAGAAATCTTTGGTGTATTGTCTTTTGTGTTTTGGACATTAACATTGATTCCACTTCTTAAATATGTGTTCATTGTGTTGAGAGCTGATGATAATGGTGAAGGAGGAACTTTTGCTTTGTACTCTTTGTTATGTAGACATGCTCGTGTGAGTTTGATGCCTAATACTCAGCTTGCAGATGAGGATTTAACACAATACACAATGGATGAAACTATTGAAgttaataagaaaaatgttgGGTCTAGTTTGAAATCTTTGTTGGAGAAACATAGAGTGCTTCAAAAAGTACTTCTTGTTCTTGCTTTGATTGGAACATGCATGGTTATTGGTGATGGTGTGCTCACACCAGCAATTTCtgtTTTTTCTGCAATTTCAGGTTTAGAGCTTTCCATGTCTAAAGAGCAGCACAAATATGTGGAGGTTCCAGTTGCTTGTATAATACTGATATTTTTATTCGCCCTGCAACATTATGGTACACACCGCATTGGATGTTTTTTCGCACCTGTTGTGTTGACCTGGTTAATATGCATCAGTGCTATCGGTCTTTATAATATAATCCACTGGAATCCACATGTTTATGAAGCTCTCTCCCCATACTACATGTTCAAATTTCTGAAAAAGACTCAATGGGGAGGTTGGATGTCGTTGGGAGGGATTCTATTATGTATAACAGGCTCAGAAGCTATGTATGCTGATTTAGGACACTTTAATCAATTGTCTATTCAGATTGCTTTCACTTTCTTGGTATACCCTTCTTTGATCCTAGCATATATGGGACAAGCTGCATATCTTTCCAAGCATCATTCCCTTGAAAGTGACTATAGAATCGGGTTTTATGTGTCTGTACCAGtAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGCAGTCAAGCTATCATCACTGGAACATTCTCAATAATCAAACAGTGTTCTTCTTTAGGGTGCTTCCCCAAAGTCAAAATCGTTCACACATCATCGAAAATACATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTTCTTTGCCTGGCTGTTACAATCGGATTTCGAGATACCAAACGAATGGGAAATGCAGCAGGTTTGGCTGTCATAACTGTCATGCTGGTAACCACGTGCCTGATGTCTCTAGTTATAGTCTTGTGTTGGCATAAAAGTGTTTGGCTAGCTATTTGCTTTATACTGTTCTTCGGCTCCATTGAAGCACTCTACTTCTCTGCATCCCTCATCAAGTTCCTTGAAGGTGCTTGGGTCCCTGTTGCCCTGTCACTCATCTTTCTTATTATCATGTATGTGTGGCACTATGGCACAATTAAGAAATATGAGTTCGATGTTCAAAATAAGGTCCCTATCAATTGGCTCCTTGGTTTAGGCCCGACTCTAGGAATCGTAAGGGTTAAAGGTATCGGCCTAATACACACCGAGCTTGTATCTGGCATCCCGgctattttctctcattttgtTACCAATCTTCCTGCTTTTCATCAAGTTGTAATCTTCCTCTGTGTCAAATCTGTCCCGGTACCGCACGTTGCACCTCGAGAAAGATTCTTAGTTGGTAGAATTGGTCCAAAGGAATATAGGCTTTATAGGTGCATAGCACGGTATGGCTACCGTGACTTTCACAAAGATGATATGGAGTTTGAGAAAGATCTTATATGCAGTATAGCCGAATTTATCCGATCCGATACTTCCGAATACGGATTAGGAAATTTTGAAGACGATACTAAGATGACAGTTGTTGGTACTTCATCGTCAAACTCAGAAGGCGTGAGGATTTCGGAAGACAATCAAGATAATAATTCTCAAATAGAAGGCACTTCGGAGTTGAAGGAAGTTAAGTCACCGGAAAAAGTGAAGAAGAGAGTGAGGTTTGTTGTGCCAGATAGTCCACGGATGGATACGGAAACAAGGGAAGAGTTGCTTGAACTAATGGAAGCAAAGGAAGCAGGAATGGCATTTATAATGAGTCACTCCTATGTGAGAGCAAAAAGAGGATCAAGTTGGATGAAAAGAGTTGCTATTAATTATGGTTATGATTTCTTAAGAAGAAACTCTAGAGGACCAACTTATGCTTTAAGTTTACCTCATGCATCTACCTTAGAGGTAGGTATGATCTATCATGTATGA 2325 0.3875 MDLESVIHKNPIKEESWKHVLVLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSDTNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLMPNTQLADEDLTQYTMDETIEVNKKNVGSSLKSLLEKHRVLQKVLLVLALIGTCMVIGDGVLTPAISVFSAISGLELSMSKEQHKYVEVPVACIILIFLFALQHYGTHRIGCFFAPVVLTWLICISAIGLYNIIHWNPHVYEALSPYYMFKFLKKTQWGGWMSLGGILLCITGSEAMYADLGHFNQLSIQIAFTFLVYPSLILAYMGQAAYLSKHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAIITGTFSIIKQCSSLGCFPKVKIVHTSSKIHGQIYIPEINWSLMLLCLAVTIGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSVWLAICFILFFGSIEALYFSASLIKFLEGAWVPVALSLIFLIIMYVWHYGTIKKYEFDVQNKVPINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVAPRERFLVGRIGPKEYRLYRCIARYGYRDFHKDDMEFEKDLICSIAEFIRSDTSEYGLGNFEDDTKMTVVGTSSSNSEGVRISEDNQDNNSQIEGTSELKEVKSPEKVKKRVRFVVPDSPRMDTETREELLELMEAKEAGMAFIMSHSYVRAKRGSSWMKRVAINYGYDFLRRNSRGPTYALSLPHASTLEVGMIYHV 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01911 774 TIGRFAM kup: potassium uptake protein 23 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu06g01911 774 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu06g01911 774 PANTHER POTASSIUM TRANSPORTER 6 1 774 - -
Tsu06g01911 774 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu06g01911 774 MobiDBLite consensus disorder prediction 648 674 - -
Tsu06g01911 774 MobiDBLite consensus disorder prediction 648 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01911 Tsu-Chr6 23379547 23385595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01911 1 774 Inorganic Solute Cotransporters AT5G14880 77.209 0.0 1222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01911 K03549 - gmx:100793387 1384.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01911 06 23379547 23385595 Tsu06g01911 06 23379547 23385595 ECH