Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01908 ATGATCAAATTTGTAACAAGCAAATTCATGACTATATCAATAATTATTCTTCTTCAACAAAACTTAGTATGTTCAAAATGTAGCTGTGAAAATCAAGTAGAAGCTTCTTATCATAAAGTTTCTGAGGCATTCAAATACAAATTAATTGCTATGGCAACAGTTTTAGTTTCTAGTCTAATTGGTGTATGCATTCCAATCTTTGCAAAAAATTGTTCGTATTTAAATccggaaaataatttttatttcttgattaAAGCATTTGCTGCTGGGGTGATCCTTGCGACCGGTTTCATACACATACTTCCTGATGCGTTTGAGGCTTTAACGAGTCCTTGTATAGGCGAAAAACCGTGGAAAATGTTTCCTTTCTCGGGATTTGTAACAATGGTAGCGGCTATTGGGACATTGATTATGGAAGCTTTGATCATGGGGTACCAAAAAAGGTCTGAAATGAAAAAATCTCAGCCGTTGGATGAGGAAGACGAGACTCATGAAGCTAATGGTAGTCATATTCATAGCTCATCACTTGCATTAGATAAATTAGATTCAACAAATCGTCTCCGGTATACTATAGTTTCTCAGATTTTGGAGCTAGGTATTCTGATGCATTCAATCATTTTAGGGATATCTCTTGGGGTGTCAAGAAGTCCTAAAACAATCAAACCTTTGGTGGCAGTTTTAACTTTTCATCAATGCTTTGAAGGAATTGGACTTGGTGGCTGCATTTCTCAggcaCAATTCAAATACTATAAGGTTGCAATTATGATAATATTCTTTTGCCTCATTTTTCCAATTGGAATTTGCATTGGAATGGGAATATCAAAATTCTACAATGAAAGTAGTCCAAAGTCACTAATAGTTGAAGGGTTTCTTCTATCAGCATCTGCAGGGGTTCTCATTAATATGGCACTTGTTGATCTTGTTGCCACTGATTTCATGAACTCAAAAATGCTAAGGAATTTTAGGCTACAAATTGGAGCAAGTTTAGCACTTTTTGTAGGGATGCTTTGCATGTCAATTTTGGCATTGGGGGAAGAAGATTACTAG 1047 0.3477 MIKFVTSKFMTISIIILLQQNLVCSKCSCENQVEASYHKVSEAFKYKLIAMATVLVSSLIGVCIPIFAKNCSYLNPENNFYFLIKAFAAGVILATGFIHILPDAFEALTSPCIGEKPWKMFPFSGFVTMVAAIGTLIMEALIMGYQKRSEMKKSQPLDEEDETHEANGSHIHSSSLALDKLDSTNRLRYTIVSQILELGILMHSIILGISLGVSRSPKTIKPLVAVLTFHQCFEGIGLGGCISQAQFKYYKVAIMIIFFCLIFPIGICIGMGISKFYNESSPKSLIVEGFLLSASAGVLINMALVDLVATDFMNSKMLRNFRLQIGASLALFVGMLCMSILALGEEDY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01908 348 Pfam ZIP Zinc transporter 45 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu06g01908 348 PANTHER ZINC TRANSPORTER 5-LIKE 15 343 - -
Tsu06g01908 348 TIGRFAM zip: ZIP zinc/iron transport family 29 343 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tsu06g01908 348 PANTHER ZINC/IRON TRANSPORTER 15 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01908 Tsu-Chr6 23344786 23346595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01908 4 343 Inorganic Solute Cotransporters AT3G12750 43.804 2.63e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01908 K14709 - jre:108984890 412.92