Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01907 ATGATCAAGTTTGTGACAAGCAAATTCATAACCATATCAATAATCATTCTTCTTCAACAAAACTTAGTATGTTCAAAATGTATCTGTGAAAATCAAGTAGAAGATTCTTATCATAAAGTATCTGAGGCATTGAAATACAAATTAATTGCTATGGCAACAGTTCTAGTTTCTAGTCTAATTGGTGTATGCATTCCaatcattgcaaaaaaatattcatatttaaagccggaaaataatttttatttttttattaaagcaTTTGCCGCTGGGGTGATCCTAGCGACCGGGTTCGTACACATACTTCCTGATGCGTTTGAGGCTTTAACGAGTCCTTGTTTAGGCGAAAAGCCGTGGAATATGTTTCCTTTCTCTAGTTTTGTAACAATGGTAGCAGCTGTAGGGACATTGATTATGGAAGCTTTGATTATAGGGTACCAAAAAAGGTCTGAAATGAGCAAACCTCAGCCGTTGGATGAGGATGACGAGACTCATGAAGCTAATGGTAGTCATGTTCATAGTTTATCTCTTGAATCGGATAAATTAGATTCAACAAATCATCTCCGGAATATTATAGTTTCTCAGATTTTGGAGCTCGGTGTTGTGTTGCATTCAATCATTTTAGGGATATCCCTTGGGGTTTCTAAAAGTCCTAAAACAATCAAACCTTTGATAGCAGTATTATCTTTCCATCAATTCTTTGAAGGAATAGGACTTGTTGGAAGCATTTCTCAGGCACAAttcaaaaattataaagttGCAATTATGATAATATTCTTTTGCCTCATTTTTCCAATTGGAATTTGCATTGGTATGGGAATATCAAAATTCTACAATGAAAATAGTTCAAAGTCACTAATAGTTGAAGGGTTTCTGCTATCAGCATCTGCAGGGGTTCTCATTAACATGGCACTTGTTGATCTTGTTGCTACTGATTTCATGAACTCAAAAATGTTAAGGAATTTTAGGCTACAAATTGGAGCAAGTTTAGCACTTTTTGTGGGGATGATTTGTATGTCAATTTTGGCATTGTATTCCTAG 1038 0.3343 MIKFVTSKFITISIIILLQQNLVCSKCICENQVEDSYHKVSEALKYKLIAMATVLVSSLIGVCIPIIAKKYSYLKPENNFYFFIKAFAAGVILATGFVHILPDAFEALTSPCLGEKPWNMFPFSSFVTMVAAVGTLIMEALIIGYQKRSEMSKPQPLDEDDETHEANGSHVHSLSLESDKLDSTNHLRNIIVSQILELGVVLHSIILGISLGVSKSPKTIKPLIAVLSFHQFFEGIGLVGSISQAQFKNYKVAIMIIFFCLIFPIGICIGMGISKFYNENSSKSLIVEGFLLSASAGVLINMALVDLVATDFMNSKMLRNFRLQIGASLALFVGMICMSILALYS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01907 345 PANTHER ZINC/IRON TRANSPORTER 15 344 - -
Tsu06g01907 345 Pfam ZIP Zinc transporter 45 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu06g01907 345 PANTHER ZINC TRANSPORTER 5-LIKE 15 344 - -
Tsu06g01907 345 TIGRFAM zip: ZIP zinc/iron transport family 29 344 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01907 Tsu-Chr6 23341185 23342930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01907 4 345 Inorganic Solute Cotransporters AT3G12750 44.286 8.08e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01907 K14709 - jre:108984890 407.912