Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01889 atgaagaagagtGAAAGTGGTGGATATGTGAGAGCAGATCAAATAGATCTGAAGAGTTTAGATGAACAATTACAAAGACATCTTAGTAGAGCATGGACTATGGAGAAGAAGAATAAggagaaagaagatgaaagtaGTGAAGTTGAAGTTGGAAGATCTTCTTCTAATACTACTTCAAGAAATAGACAAGAATGGGAGATTGATCCTTCAAAACTTATTATCAAAACTGTCATTGCAAGGGGTACTTTTGGTACTGTTCATCGTGGTGTTTATGATGGCATAGATGTTGCTGttaagcttcttGATTGGGGGGAAGAGGGACATCGGTCAGATGCAGAAATAGCTTCATTGCGAGCGGCTTTTACACAAGAAGTTGCGGTTTGGCACAAGCTTGATCATCCTAATGTAACCAGGTTTCTTGGTGCAACAATGGGAACATCAGACCTACAGATACAAACGGAAAACGGGCATATAGGCATGCCGAGTAATCTATGTTGTGTTGTTGTAGAGTATTGTCCTGGTGGTGCTTTGAAGTCATATCTAATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTAGCTCTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAAATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTAGACAAGACACGAACGTTGAAAATCGCTGATTTTGGAGTAGCTCGTATCGAAGCTTCAAATCCTCATGACATGACTGGTGAAACTGGAACCCTTGGTTATATGGCTCCTGAGGTTCTAAATGGAAGTGCATACAATAGAAAATGCGATGTGTATAGTTTCGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCAGAAGTAACATCAGCTGTTGTACGACAGAATCTAAGGCCAGAGATTCCGCGATGTTGTCCAAGTTCTCTCGCAAATGTGATGAAAAGATGCTGGGATGCTAATCCTGATAAGAGACCTGAGATGGATGAAGTTGTCACCCTGTTGGAAGCTATTGACACTTCAAAAGGCGGAGGTATGATCCCTCTTGATCAGCCACAAAGTTGTTTATGTTTCCGCAGAGATGTTCGTTACACGATATTCTGGAAAAtcaATTCTGGTAACAATCGTAAAGATCTGGTTTCTCCAATAGCCTTGAAGGCTGAACTAAGTGTCGATTAA 1212 0.3936 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKKNKEKEDESSEVEVGRSSSNTTSRNRQEWEIDPSKLIIKTVIARGTFGTVHRGVYDGIDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTRFLGATMGTSDLQIQTENGHIGMPSNLCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHMKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTLLEAIDTSKGGGMIPLDQPQSCLCFRRDVRYTIFWKINSGNNRKDLVSPIALKAELSVD 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01889 403 Gene3D Transferase(Phosphotransferase) domain 1 172 366 - -
Tsu06g01889 403 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 369 - -
Tsu06g01889 403 PRINTS Tyrosine kinase catalytic domain signature 169 182 IPR001245 GO:0004672|GO:0006468
Tsu06g01889 403 PRINTS Tyrosine kinase catalytic domain signature 207 225 IPR001245 GO:0004672|GO:0006468
Tsu06g01889 403 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Tsu06g01889 403 PRINTS Tyrosine kinase catalytic domain signature 317 339 IPR001245 GO:0004672|GO:0006468
Tsu06g01889 403 ProSiteProfiles Protein kinase domain profile. 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01889 403 CDD STKc_MAP3K-like 78 346 - -
Tsu06g01889 403 SUPERFAMILY Protein kinase-like (PK-like) 52 346 IPR011009 -
Tsu06g01889 403 Gene3D Phosphorylase Kinase; domain 1 60 155 - -
Tsu06g01889 403 MobiDBLite consensus disorder prediction 30 49 - -
Tsu06g01889 403 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 369 - -
Tsu06g01889 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Tsu06g01889 403 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Tsu06g01889 403 MobiDBLite consensus disorder prediction 30 63 - -
Tsu06g01889 403 SMART serkin_6 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01889 Tsu-Chr6 23087370 23092339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01889 2 313 MAP Kinase Kinase Kinase AT3G01490 74.713 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu06g01889 PK_Tyr_Ser-Thr 1.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01889 - - gmx:100806635 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01889 06 23087370 23092339 Tsu06g01889 06 23087370 23092339 ECH