Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01885 ATGGCAAACACACCTAATATAAGTATTCCATCTAATACAAAAGCTTGGGTTTATTCTCAATATGGTAACATagaaaaaaatctaaagtttGATACTAATGTACCTACACCACACCCTAAAGAAGATCAAGTTCTCATCAAGGTTGTGGCTGCTGCCCTTAATCCTGTTGATATCAAGAGGGCTCTTGGCTATTTCAAGGACATTGACTCTCCTTTGCCAACTGTACCAGGATATGATGTTGCTGGTGTGGTGGTTAGTGTGGGAGATCAAGTGAAGAAATTTAAAGTTGGAGATGAAGTTTATGGTGATATTAATGAGAACACTATAGACCATCCAAAAACTGTTGGTTCTGTGGCAGAGTACACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCAAATTTAAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCAATAATTACTGCTTATCAAGGACTTGAAAGAATTGACTTTTCTTCTGGTAAATCTATACTTGTTCTTGGAGGTGCCGGCGGAGTTGGATCTCTTGTTATTCAGCTAGCCAAACATGTTTTTGGAGCATCTAGAATTGCAGCTACTGCTAGCACAtcaaaacttgaatttttgaagaACTTGGGAGTAGACTTGGCTATAGATTATACTAAAGAGAATTTTGAAGAACTTGCAGAAAAATTTGATGTGGTGTATGATGCAGTAGGTGAGAGTGAGAGGGGACTAAAGGCAATTAATGAGGGTGGAAAAGTTGTGACAATAGTGCCGCCCGGAACACCGCCGGCTATCCCTTTTGGACTCAATTCTGATGGAGCTGTGTTAGAGAAATTGCAACCTTACTTCCAGAGTGGCAAAGTGAAGCCAATATTAGACCCTAAGAGTCCCTTTCCATTTTCTCAGACTGTGGAAGCATTCTCTCATCTCAATACTAATAGAGCTATTGGGAAAATAGTTATTCATCCTATTCCTTAA 969 0.3849 MANTPNISIPSNTKAWVYSQYGNIEKNLKFDTNVPTPHPKEDQVLIKVVAAALNPVDIKRALGYFKDIDSPLPTVPGYDVAGVVVSVGDQVKKFKVGDEVYGDINENTIDHPKTVGSVAEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERIDFSSGKSILVLGGAGGVGSLVIQLAKHVFGASRIAATASTSKLEFLKNLGVDLAIDYTKENFEELAEKFDVVYDAVGESERGLKAINEGGKVVTIVPPGTPPAIPFGLNSDGAVLEKLQPYFQSGKVKPILDPKSPFPFSQTVEAFSHLNTNRAIGKIVIHPIP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01885 322 Pfam Alcohol dehydrogenase GroES-like domain 42 104 IPR013154 -
Tsu06g01885 322 CDD MDR_like_2 14 318 - -
Tsu06g01885 322 SMART PKS_ER_names_mod 22 318 IPR020843 GO:0016491
Tsu06g01885 322 Gene3D - 20 318 - -
Tsu06g01885 322 Gene3D - 155 269 - -
Tsu06g01885 322 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 7 322 - -
Tsu06g01885 322 SUPERFAMILY GroES-like 10 170 IPR011032 -
Tsu06g01885 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 261 IPR036291 -
Tsu06g01885 322 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 163 184 IPR002364 GO:0008270|GO:0016491
Tsu06g01885 322 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 7 322 IPR044626 GO:0016628
Tsu06g01885 322 Pfam Zinc-binding dehydrogenase 207 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01885 Tsu-Chr6 22976959 22985619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01885 69 232 Monolignol Biosynthesis Gene Families AT1G72680 28.646 1.73e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01885 K18980 - gmx:100791274 486.878