Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01874 ATGGCAGCCAACAATGCTGAAACCACACTTGCTTTGGAGAGTCTAAGAGCTCCTTTGAATCCATTTCCTATTACAAATCAGGAGAAGTACCTTAATGACATGAGATTGAAGTATCGCACTTATTTTGTGGAATACAGTATTGATCAGggtGCAATTATGCTTCCACGGATGTTTTCAAGTGATTTTGGGGATGAGATATATCGCTTTGTTACTTTGGTTGACTCACGTCAGAACCAGTTTGAAGTTCTGGTTGAAAAAATTGATAACAACGTTTATTTCACACGTGGGTGGGCTTCTCTTCGTGACTTTTACAATATACAGATTGGTGCTTGGTTTGCTCTAATGTACACAGGGTTGGGGCAATTTGGCGTTGGTTTGCATACTAGGTTTCAACGATTGATCACTCCTCCTTTATGTGATCCTCCCATGAGATTTGTTTTGGACAAATTTGGTGTGCCTCAAaactttgttgatgatttgtcTTCCTCCATTGAACATCTTTCTTATTCACACCAAgaatctttttttcattttgtccATGAAAAAAACCTCACTTACTATGATGTCTCCACTGGGTTTTTGTCACTCCCTTATGATGGATTCGGTGAGTTTGTTTTCGATGAAGCTGTGGAGTCTATTAATTTGGTGGATGAATGTGGTAATTTGTGGATATGTGATTTAACATTGGTCACTTTCCCTTGCAAGCATTTCAAAATTGGAGGGGATTGGAGTCGAATGGTTTCTGCTAGGAGATTGTCCATTGGTGTGTCTGTCAAGATTGGTGCTCCCCCTGGTGGACACAACGAATCAATTTATTTCATGCTCACTGCTTAG 834 0.3813 MAANNAETTLALESLRAPLNPFPITNQEKYLNDMRLKYRTYFVEYSIDQGAIMLPRMFSSDFGDEIYRFVTLVDSRQNQFEVLVEKIDNNVYFTRGWASLRDFYNIQIGAWFALMYTGLGQFGVGLHTRFQRLITPPLCDPPMRFVLDKFGVPQNFVDDLSSSIEHLSYSHQESFFHFVHEKNLTYYDVSTGFLSLPYDGFGEFVFDEAVESINLVDECGNLWICDLTLVTFPCKHFKIGGDWSRMVSARRLSIGVSVKIGAPPGGHNESIYFMLTA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01874 277 SUPERFAMILY DNA-binding pseudobarrel domain 179 255 IPR015300 -
Tsu06g01874 277 SUPERFAMILY DNA-binding pseudobarrel domain 43 125 IPR015300 -
Tsu06g01874 277 Gene3D - 33 129 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01874 Tsu-Chr6 22915249 22916332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01874 46 124 B3 DNA Binding Superfamily AT3G18990 31.646 2.25e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01874 - K01876 mtr:MTR_4g032560 233.417