Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01866 ATGGCAAACACACCTAATATTCCATCTCATACAAAAGCTTGGGTTTATTCTCAATACGGTAACATTGAACAAATTCTAAAGTTTGATACTAATGTACCTACACCACACCCTAAGGAAGATCAAGTTCTCATCAAGGTTGTGGCTGCTGCCCTTAATCCTGTTGATATTAAGAGGGCTCTTGGTCATTTCAAGGACATTGACTCTCCTTTGCCAACTGTACCAGGATATGATGTTTCTGGAGTGGTGGTTAGTGTGGGAGATCAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGATCACTTTAGACCATCCAAAAACTGTTGGTTCTGTGGCAGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCAAATTTAAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCAATAATTACTGCTTATCAAGGACTTGAAAGAATTGACTTTTCTTCTGGTAAATCTATACTTGTTCTTGGAGGAGCCGGCGGAGTTGGATCTCTTGTTATACAGCTAGCCAAGCATGTTTTTGAGGCATCAAGAATTGCAGCTACTGCGAGTACtacaaaacttgaatttttgaagaagttGGGAGCAGATTTGGCAATTGATTATACTAAGGAGAATTATGAAGAACTTTCAGAAAAATTTGATGTAGTGTATGATGCAGTAGGTGATAGTGAGAGGGCAGTGAAGGCTATTAAAGAAGGAGGAAAAGTTGTGACAATACTTCCACCCGGAACACCGCCAGCTATCCCTTTCTTACTGACTTCAGATGGAGCTTTGTTAGAGAAATTGCAACCTTACTTGGAGAGTGGCAAAGTGAAGCCAATATTAGACCCTAAGAGTCCCTTTCCATTTTCTCAGACTGTGGAAGCATTTTCATATCTTAATACTAATAGAGCTGTTGGGAAAATAGTTATACATCCCATTCCATGA 963 0.3863 MANTPNIPSHTKAWVYSQYGNIEQILKFDTNVPTPHPKEDQVLIKVVAAALNPVDIKRALGHFKDIDSPLPTVPGYDVSGVVVSVGDQVKKFKVGDEVYGDINEITLDHPKTVGSVAEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERIDFSSGKSILVLGGAGGVGSLVIQLAKHVFEASRIAATASTTKLEFLKKLGADLAIDYTKENYEELSEKFDVVYDAVGDSERAVKAIKEGGKVVTILPPGTPPAIPFLLTSDGALLEKLQPYLESGKVKPILDPKSPFPFSQTVEAFSYLNTNRAVGKIVIHPIP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01866 320 CDD MDR_like_2 12 316 - -
Tsu06g01866 320 Gene3D - 18 316 - -
Tsu06g01866 320 SMART PKS_ER_names_mod 20 316 IPR020843 GO:0016491
Tsu06g01866 320 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Tsu06g01866 320 Gene3D - 153 267 - -
Tsu06g01866 320 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Tsu06g01866 320 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 1 320 - -
Tsu06g01866 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
Tsu06g01866 320 SUPERFAMILY GroES-like 8 168 IPR011032 -
Tsu06g01866 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Tsu06g01866 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 320 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01866 Tsu-Chr6 22866157 22868181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01866 39 261 Monolignol Biosynthesis Gene Families AT4G37980 24.506 2.41e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01866 K18980 - gmx:100791274 493.041