Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01842 ATGCAAGCACAACTTCTAATGATTGTTCATCATAGAAATTTTGTCTCTCTCATTGGATattgtgatgaagatgaaatCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACACTTATCAGTGAAAAATACAAATATCTTAAAATGGAATGAGAGGCTTAACATTGCAGTTGATGCAGCACACGGATTGGATTATCTGCATAATGGATGTATACCACCTATTATGCATAGAGATTTGAAACCATCTAACATATTACTAGATGAAAACATGCATGCCAAAATTGCAGATTTTAGTATAAGTAGAGCTTTCAGTGATGATATAAATTCTCATATATCCACGCGCCCTGCCGGTACATCTAGTTACATTGATCCTGGTTACATTGTCTCTGCTAGTATCACAAAGAATTGGATGaaggTGTTCAATGATCCCACGTCATTAACAGATGACGAGATGTATAATTTGCGAAACCGCTGGGCAACTTGTTTTCTTGATCTATTTAACCCTACGGTAGATTATGATGATGCCGATGAGGAAGCTTATTAA 555 0.3477 MQAQLLMIVHHRNFVSLIGYCDEDEIKALVYEYMANGNLQQHLSVKNTNILKWNERLNIAVDAAHGLDYLHNGCIPPIMHRDLKPSNILLDENMHAKIADFSISRAFSDDINSHISTRPAGTSSYIDPGYIVSASITKNWMKVFNDPTSLTDDEMYNLRNRWATCFLDLFNPTVDYDDADEEAY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01842 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01842 184 Pfam Protein kinase domain 5 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01842 184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Tsu06g01842 184 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 2 138 - -
Tsu06g01842 184 SMART serkin_6 3 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01842 184 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Tsu06g01842 184 SUPERFAMILY Protein kinase-like (PK-like) 3 134 IPR011009 -
Tsu06g01842 184 PANTHER OS07G0107800 PROTEIN-RELATED 2 138 - -
Tsu06g01842 184 Gene3D Transferase(Phosphotransferase) domain 1 35 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01842 Tsu-Chr6 22059496 22060395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01842 2 128 Receptor kinase-like Gene Family AT2G19230 56.693 4.00e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu06g01842 Pkinase 5.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01842 - - mtr:MTR_8g014970 223.016