Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01838 ATGGAGTTTTTAGTGAAAGAGATGGGTTGGGAGTATACTATGCTCGCCAAATATCCGATACTTATTATGCTGAGTTTGGAGAAAAGGATTGTTCCTAGGGCTTATGTCTTGAAGTTTCTTGAATCTAAAGGTTTGATTGAGGATGCTAAATTGGCTGAACCTTTTAAAGTTACTGAAAAGGagtttttgaagaaatttgtgAATTGTTTTAAGGAAGAAGCTTCTCAGCTGTTGAAGTTGTATGAAGAGAACAAAAATGTTCCAAATAGGGTTTTTAAAAAAGGTTCGCGACCAGGACCGTGGAAGGAACGTAAAGGGTCTCAGCTACACGACAAAGGGTCTCTGCAACTTAGACCCTTTCTTTGA 366 0.3689 MEFLVKEMGWEYTMLAKYPILIMLSLEKRIVPRAYVLKFLESKGLIEDAKLAEPFKVTEKEFLKKFVNCFKEEASQLLKLYEENKNVPNRVFKKGSRPGPWKERKGSQLHDKGSLQLRPFL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01838 121 Gene3D Transcription termination factor 3, mitochondrial 1 80 IPR038538 -
Tsu06g01838 121 Pfam mTERF 1 63 IPR003690 GO:0003690|GO:0006355
Tsu06g01838 121 PANTHER CGI-12 PROTEIN-RELATED 1 84 IPR003690 GO:0003690|GO:0006355
Tsu06g01838 121 MobiDBLite consensus disorder prediction 90 113 - -
Tsu06g01838 121 PANTHER OS04G0637500 PROTEIN 1 84 - -
Tsu06g01838 121 MobiDBLite consensus disorder prediction 90 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01838 Tsu-Chr6 21929844 21930209 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu06g01838 mTERF 3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01838 K15032 - gmx:102663105 98.9821