Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01835 atgTTTTGTCACTCTCGCAGAGCATTGCTCTGCCCTAACCTATCATTCAAAACCCAAAAACCCTCTTCattccttcttcttctccaacATTTTTCTACTTCCAATCAACAACAATCTTTCACAGTCAACTACCTCGTTCAAACCATCGGTTTCTCCCATGAAACAGCTTCAAAACTCTCCAACCAAGTTCATTTCAATGACTCACAAAAACCATACACAGTCTTAGAATTTTTCAAATCCTATGGCTTctcaaataatcacttatttcgTATAATCAAAACTCGCCCAGATATTCTCTCTTTTGATCCCAACAAAACCATTCTCCCCAAATTCAATTTCCTTCTCTCAAAGGGTGCTTCAAAATCCGATCTTGTTCATATCATTACacaaaatccaagatttttataTCAAAGCTTGGAAAATTCTATCACCCCATCTTATGatttcatcaaaaaattcttactttCTGATAAAGCTACCATTGCCTCTATCAGACAAAGACCTTCTTCGATTAATACTAAAATCTCATCTCAGaatattcaatttttgcttCAAAATGGTGTCCCTCAATCAAAAgttgtgattttgtttaaagatTGGTATTACATACTTACTCAGAATCCTCCGATTTTTGAGAAGGTAGTGGTGGAACTAAAGCGAATAGGATTTGATCCTAAAACGACGTTTTTCATTACTGCGTTGCGTGCTAAGAGTTTGACATCTGCTTGGCAAAGGAAGGTTAGTGTGTATAAGAAATGGGGTTGGTCTAAAGAAGATATTGTTGCAGCATTTTTGAAGCATCCATGGTGTATGTTGGCTTCTTTGGATAAAATTGAGGCAGTGATGGAGTTTTTA 855 0.324 MFCHSRRALLCPNLSFKTQKPSSFLLLLQHFSTSNQQQSFTVNYLVQTIGFSHETASKLSNQVHFNDSQKPYTVLEFFKSYGFSNNHLFRIIKTRPDILSFDPNKTILPKFNFLLSKGASKSDLVHIITQNPRFLYQSLENSITPSYDFIKKFLLSDKATIASIRQRPSSINTKISSQNIQFLLQNGVPQSKVVILFKDWYYILTQNPPIFEKVVVELKRIGFDPKTTFFITALRAKSLTSAWQRKVSVYKKWGWSKEDIVAAFLKHPWCMLASLDKIEAVMEFL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01835 285 PANTHER CGI-12 PROTEIN-RELATED 22 284 IPR003690 GO:0003690|GO:0006355
Tsu06g01835 285 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 284 - -
Tsu06g01835 285 Pfam mTERF 75 285 IPR003690 GO:0003690|GO:0006355
Tsu06g01835 285 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Tsu06g01835 285 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Tsu06g01835 285 SMART mt_12 194 224 IPR003690 GO:0003690|GO:0006355
Tsu06g01835 285 Gene3D Transcription termination factor 3, mitochondrial 178 285 IPR038538 -
Tsu06g01835 285 Gene3D Transcription termination factor 3, mitochondrial 36 177 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01835 Tsu-Chr6 21873544 21874398 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu06g01835 mTERF 2.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01835 K15032 - gmx:102663105 293.508