Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01817 ATGGATGGAAACAAAGACGATGCATTGAAATCGTTGAAAATCGGTAAAGAAGCGTTAGAAAGTGGAGATCGTAATCGCGCTTTGAAGTTTCTTAACAAAGCTCGCCGTCTCGATCCTACTCTTCCGATCGATGATCTGCTTTCCACCATAGACAGCGATGCAGGCGATCATCCCACGGCAGCTGCCGAGCCGCGGCCGAATCAATCGGACCAACCTTCTATTCGTCGAAGGACTGCTGCTCCAGCGCAAGGGACTTCATTGTCGTCCGCGACATCATATAGTGAGGAGCAGGTTTTGATTGTAAGAGAAATTAAGAGGAAGAagaattattatgatattttagGGTTGGAGAAGAATTGCACAGTGGATGATGTGCGAAAATCGTATAGGAAGCTGTCTTTGAAGGTTCATCCTGACAAGAACAAAGCCCCCGGAGCTGAGGAAGCATTTAAGTCTGTTTCAAAGGCTTTTCAGTGTCTTAGTAATGAGGAGAGTAAGAGAAAGTATGATCTTTCTGGAGAAGATGAAATTGTTTATGAAAGGCGCGCTGCTGCTAGGCCTGCGGCCAGAGGTTTTAAATGGTTACTATGA 591 0.4467 MDGNKDDALKSLKIGKEALESGDRNRALKFLNKARRLDPTLPIDDLLSTIDSDAGDHPTAAAEPRPNQSDQPSIRRRTAAPAQGTSLSSATSYSEEQVLIVREIKRKKNYYDILGLEKNCTVDDVRKSYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNEESKRKYDLSGEDEIVYERRAAARPAARGFKWLL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01817 196 ProSitePatterns Nt-dnaJ domain signature. 150 169 IPR018253 -
Tsu06g01817 196 ProSiteProfiles dnaJ domain profile. 109 173 IPR001623 -
Tsu06g01817 196 SUPERFAMILY Chaperone J-domain 81 169 IPR036869 -
Tsu06g01817 196 PANTHER - 1 187 - -
Tsu06g01817 196 PRINTS DnaJ domain signature 111 129 IPR001623 -
Tsu06g01817 196 PRINTS DnaJ domain signature 129 144 IPR001623 -
Tsu06g01817 196 PRINTS DnaJ domain signature 145 165 IPR001623 -
Tsu06g01817 196 MobiDBLite consensus disorder prediction 64 89 - -
Tsu06g01817 196 MobiDBLite consensus disorder prediction 45 89 - -
Tsu06g01817 196 CDD DnaJ 109 162 IPR001623 -
Tsu06g01817 196 Gene3D DnaJ domain 83 169 IPR036869 -
Tsu06g01817 196 PANTHER AT29763P-RELATED 1 187 - -
Tsu06g01817 196 Pfam DnaJ domain 109 170 IPR001623 -
Tsu06g01817 196 SMART dnaj_3 108 165 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01817 Tsu-Chr6 21341814 21342404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01817 4 181 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.322 1.59e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01817 K09518 - gmx:100793797 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g01817 06 21341814 21342404 Tsu06g01817 06 21341814 21342404 ECH