Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01799 ATGGATATTCCACGCGCCTCACACCCCGTTATCGATCCCAAATTAAGGCGCGTTGGTTTCTTCGACCAACCCGAACCCCCGCACCTTCCGGACTCTCCACCACTCGACCCGGTCTCCTCCGTCATCATGCCACCTCCACGTCTTCTTTCCGAACGAACCGCCGCCGTTCCTGTTCCCGAGTCCAGGTTCCGACGCCACGAACTCGACGATCAGATGCCGATTGGGAGTTACAATCCCGCCGGGATTACAATCTCGCCGACGGCTTCAATTACTTCTAGCAGTGCCGGGATCATTGACGGCGAGTTCTCTGAGGATTGTTCTGGTACCGGATGGTTTCGTGGCAGTGAATTAAGTTTTCCTGACGGAAGGTTGGATTTATCGGCCGTGAAGCCTCATGAAGTTTTGGCGGAGAACAGGTATGATGATGCGGTGAACGTGAATAATCTTCGTGGAGGCACTGAAAAGAAGCACGAGGCTGTCAAAGTATGTCCTGATACGCCATCAGTTTCACAGCCACTGAAAGCAAAAACTACAAAGGCTGAGAGACGAGCCCTGCAGGAAGCACAAAGAGCTGCAAAAGCTGCATCTAAAGCTAATGGAAGTTCCGCAGTTGCTGAATCTGGCAAAGCATCCCCAGCGAAAAGTAAAAAGCAGTCTTCACAAAAGAAAGATGGTCCTCCAGTTATGTCATCAGTCACTATTGATAAGAAATCTGGGAATCATCCTTcggagaaagagagaaaaaaagatcCTCCTCCTCAACAAATGCAATTTGATGATCAAAACAGAGTGGAAAAAGCTAAAAGGCGTGCACTAGTAAATCAAACTGAAGCAAGAAACAGAGTTGAATTATTTCGGCATTTGCCTCAATATGAACATGGGGCTCAGCTTCCTAATCTTGAGTCGAGGTTTTTCCAACTCGACTCGATACATCCTGCTGTGTTCAAGGTTGGATTGCGTTATATGGCCGGAGATATATCAGGAGTTAATGCTCGTTGTACCGAACTGCTTAGAGCGCTTCAGAATGCCATTATAGACTACTCCACTCCGCCTGAAAAAGTACTTATTAGGGATTTAACTACAAAAATTAATAGTTATGTTTCATTTATTAGCGAATGCCGACCAATTTCTATTAGCATGGGAAATGCAATTAGGTTTGTGAAAAATCGAATTGCCAAGCTGCCCTTAAGCTATATTGATGCTGAGGCAAAAGCAGCTCTTTGTTCTGATATTGACCGATtcattaatgaaaaaataattattgcgGATAAGGTGATTGTTGGACATGCGACTACCAAAGTTAGGGATGGAGATGTTCTTCTTATATATGGATTGTCTTGTGTCGTTGAGATGATTCTCTTATCTGCGCATGATCTTGGGAAAAAATTCCGAGTTGTGGTGGTAGACTCACGACCAAAGTTTGAAAGTCAGGCCTTACTTGCTAGGCTTATGGCCAAGGGCCTGAGTTGTACGTATACTCATATAAATGCTGTTTCTTATATCATTCACGAGGTTACAAAAGTTTTTCTGGGAGCTTCTGCTGTCCTGTCTAATGGAACTGTACTTTCAAGGATTGGGACAGCATGTATTGCAATGGTGGCTCATGAATTTCGTGTTCCTGTGTTAATTTGTTGTGAAGCTTTTAAGTTTCATGAAAGGGTGCTACTTGATTCAATATGTTGCAACGAATTAGGCGACCCAGATGCTGTTGCTACAGTTCCTGGAAGAATGGATATCAATTATCTGGACAATTGGACAAACAAAGAGAATTTGCAGCTTTTgaatttgatGTATGATGTTACTCCTTCGGATTACGTCTCAGTTATTGTTACAGATCATGGAATGATCCCTCCTACAAGTGTGCCTGTGATTGTACGCGAGTATGGACAAGAGCATTACATTACTTGA 1908 0.4298 MDIPRASHPVIDPKLRRVGFFDQPEPPHLPDSPPLDPVSSVIMPPPRLLSERTAAVPVPESRFRRHELDDQMPIGSYNPAGITISPTASITSSSAGIIDGEFSEDCSGTGWFRGSELSFPDGRLDLSAVKPHEVLAENRYDDAVNVNNLRGGTEKKHEAVKVCPDTPSVSQPLKAKTTKAERRALQEAQRAAKAASKANGSSAVAESGKASPAKSKKQSSQKKDGPPVMSSVTIDKKSGNHPSEKERKKDPPPQQMQFDDQNRVEKAKRRALVNQTEARNRVELFRHLPQYEHGAQLPNLESRFFQLDSIHPAVFKVGLRYMAGDISGVNARCTELLRALQNAIIDYSTPPEKVLIRDLTTKINSYVSFISECRPISISMGNAIRFVKNRIAKLPLSYIDAEAKAALCSDIDRFINEKIIIADKVIVGHATTKVRDGDVLLIYGLSCVVEMILLSAHDLGKKFRVVVVDSRPKFESQALLARLMAKGLSCTYTHINAVSYIIHEVTKVFLGASAVLSNGTVLSRIGTACIAMVAHEFRVPVLICCEAFKFHERVLLDSICCNELGDPDAVATVPGRMDINYLDNWTNKENLQLLNLMYDVTPSDYVSVIVTDHGMIPPTSVPVIVREYGQEHYIT 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01799 635 MobiDBLite consensus disorder prediction 151 267 - -
Tsu06g01799 635 Pfam Initiation factor 2 subunit family 326 618 IPR000649 GO:0044237
Tsu06g01799 635 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 633 - -
Tsu06g01799 635 MobiDBLite consensus disorder prediction 200 215 - -
Tsu06g01799 635 SUPERFAMILY NagB/RpiA/CoA transferase-like 311 628 IPR037171 -
Tsu06g01799 635 MobiDBLite consensus disorder prediction 222 237 - -
Tsu06g01799 635 MobiDBLite consensus disorder prediction 238 254 - -
Tsu06g01799 635 MobiDBLite consensus disorder prediction 1 38 - -
Tsu06g01799 635 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 633 - -
Tsu06g01799 635 Gene3D - 421 628 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01799 Tsu-Chr6 20933252 20938920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01799 1 634 Eukaryotic Initiation Factors Gene Family AT5G38640 55.172 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01799 K03680 - gmx:100778711 790.801