Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01781 ATGGAGAGCAAAATTgtcCATAAGGATAACAAGGATCCCTTTATGATGTCTGGTTGTACGGTTGCAGATGGCAATGGAACTATGTTGGTGAGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCTACCACCATATGCAGTGATAAGACTGGCACATTGACTATGAATCATTTGGTTCATGTTATTGGCCTTTCAACAATGCATGGCAACAAGTTTACTCAACCACAGATCAAGTGCTATATGCAACGATTTCTTCGTGGTCTTGAGCATTGTCACAGTAGTGGTGTTATGCATCGAGACATAAAGGGCTCAAACCTTCTGCTTGACAATAATGGCAATCTGAAGACTATTGAATGA 357 0.4174 MESKIVHKDNKDPFMMSGCTVADGNGTMLVRRLSACETMGSATTICSDKTGTLTMNHLVHVIGLSTMHGNKFTQPQIKCYMQRFLRGLEHCHSSGVMHRDIKGSNLLLDNNGNLKTIE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01781 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01781 118 Gene3D - 25 65 - -
Tsu06g01781 118 Pfam Protein kinase domain 60 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g01781 118 PANTHER CELL DIVISION PROTEIN KINASE 62 115 - -
Tsu06g01781 118 Gene3D Transferase(Phosphotransferase) domain 1 66 118 - -
Tsu06g01781 118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Tsu06g01781 118 PANTHER F21B7.34 62 115 - -
Tsu06g01781 118 ProSitePatterns E1-E2 ATPases phosphorylation site. 48 54 IPR018303 -
Tsu06g01781 118 SUPERFAMILY HAD-like 34 86 IPR036412 -
Tsu06g01781 118 SUPERFAMILY Protein kinase-like (PK-like) 67 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01781 Tsu-Chr6 20622358 20624138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01781 55 115 Core Cell Cycle Gene Families AT5G64960 59.016 2.96e-19 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tsu06g01781 Pkinase 4.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01781 - K08819 cam:101495256 91.6633