Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01775 ATGGGTGGTGGTAGAACTAGAAAGAAGAGGAACCAGTTGAGCAGAATCCATGCATTCTCAAGTGGGAAAACTTCATTCAAAGGTGAACATTCACTTATAGGAGGACCTGGTTTTGGAAGGATAGTTTACTGCGAAGAAAACGAAAGTGGTGTGAATTATTGTGATAATTATGTGAGAACTacaaaatatacaatgtttACTTTCATCCCTAAATCATTGTTTGAGCAATTCAGAAGAGTTGCAAATTTTTACTTCCTTGTTTGTGCAATCTTGTCTTTTTTTCCTGTTTCTCCTTACTCAGCTGTTAGCAATGTTGTTCCTCTTGTTGTTGTGGTTGCTGCTACAATTGGGAAAGAGGCTGTTGAGGATTGGAGAAGGATGAAGCAGGATATCGAGATGAATAACAGAAAGGTTAAAGTCCATAAAGGAGAAGGTGTTTTTGACTACTCTAAATGGCGTGATTTGAATGTTGGAGACTTAGTGAAGGttgaaaaagatgaattttttccTGCTGATCTCATACTACTTTCATCAAGCTATGAAGATGCAATTTGCTATGTTGAGACAATGAATCTCGATGGAGAAACAAATCTTAAACTCAAACAAGCACTTGATGAAACTTCCAAATTTCTAGAAGACTCCACCTTCCGAAATTTCAAAGCAATCATCAAATGTGAAGATCCAAATGCATATCTATACTCTTTTATAGGAAACATTGAGCTTGAAGATCAACTATATCCACTTTCGCCTCAGCAGTTGTTGCTTAGGGACTCAAAGCTTAGGAACACTGATTTTATATACGGCGTAGTTATCTTTACCGGACATGATACAAAAGTTATGCAGAATTCGACCGACTCTCCATCTAAGAGAAGCAAAGTTGAGAAGCGAATGGATAAGATAATCTATTTTCTCTTctcagttttgttttttatttcttttattggtTCAATTTTCTTCGGCATTACAACAAGTGAGGATATTGAAAATGGAGTAATGAAGAGATGGTACCTCAGACCAGATGATACTACGATCTACTACAATCCGAAGAAAGCACCGATTGCGGCAATGCTTCATTTCTTGACTGCACTAATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTGAAAGTCCTTCAAAGCATCTTCATCAACCACGATGTACACATGTATTACGAGGAAACTGACCAGCCTGCACGCGCCCGTACCTCAAATTTGAACGAAGAACTTGGTCAAGTTGATACTATTCTTTCGGATAAAACAGGAACTTTGACTTGTAATTCTATGGAATTCGTCAAGTGTTCAATTGCTGGGATCGCCTACGGACGAGGTGTTACAGAAGTTGAGAGAGCTCTAGCAAGGAGAAAACACTTAGATGGCAATGTTGCGGAGATTTCTGAAGCAAAGTCATCCATTAAAGGTTTTAACTTCACGGATGAAAGGATTATGAATGGAAATTGGGTCAAGGAAACTCACGCcaatgtaatccagaacttcaTACGTTTGTTGGCGGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACCGGCAATGTTTCTTATGAAGCTGAGTCACCGGATGAGGCCGCTTTTGTAATTGCAGCTAAACAACTTGGATTTGAGTTTTATGAAAGGACCCAGACAACTATTTCCCTGTGCGAGTTCAATTCCACAATAAGCAGGACTATTAGAAGGTCCTACAAGCTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAAAGAATGTCTGTTATTGTAAGAGATGAGGAGGGGAAATTACTACTTCTAAGCAAAGGGGCTGACAGTGTCATGTTTGAACGGCTTGGAAAGAATGGAAGGGAGTTTGAAGAAAAGACTAAGCAGCACATTAATGAATATGCTGATGCTGGTTTGAGGACCCTGATACTTGCCTATCGTGAACTTGATGAACAAGAGTACAACCTTTTCAATAAAGAATTGATGGAAGCCAAGAGCTTAGTAAGTGCGGATCGGGAGCAGATTGTGGAGGAAGTATTAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACCGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCAGGAATTAAGTTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATGTTGGGTTTGCTTGTAGTTTACTTAGGCAAGGGATGAAGCAAATTATAATTAGTTCAGACACTCCAGATATCAAATCACTGGAGAAAGTGGAGAACAATTCTGCTGTTGCTTTTGAAATCAAGGCAAACGTTATTTCTCAATTAAGGGAAGGAAAGGAATTACTAACTGCATCTAATGTAAAATCTGAGGCATTAGCTCTAGTAATTGATGGCAAGTCTCTCACATATGCACTAGAAGATGATGTAAAAGACTTGTTTCTCACCTTTGCAGTTGGTTGTGCATCTGTTATATGCTGTCGTTCATCTCCAAAGCAAAAAGCACTTGTTACTAGACTAGTAAAGATTAAAACAGGTTGCACAACTCTAGCAATTGGTGATGGTGCAAATGACGTTGGAATGCTCCAAGAAGCAGATATTGGGATTGGCATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCTCAATTTCGGTATCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGTTACTTCTTTTACAAGAATATTGCCTTTGGCATTACTCTATTCTTGTATGAGATTTATGCCTCATTCTCGGGTCAAGTTGCATACAATGATTGGTTCCTGTCACTATATAATGTATTCTTCACTTCACTTCCTGTAATCGCCTTGGGAGTATTTGACCAAGATGTCTCTGCTAGATTATGTCTCGAGTTCCCATTATTATATCAAGAAGGTGTACAAAATGTCCTATTTAGCTGGAAAAGGATTCTAGGTTGGGCATTCAATGGAGTAACAAGTGCTATCACAGTATTCTTCTTCTGCATTAATGCGATTGAGAATCAAGCATTCCGCAAAGGAGGCGAAGTAGTTGGACTTGAAGTTCTTGGTGCAACAATGTACACATGTGTTGTGTGTGTAGTGAATTGTCAAATGGCATTATCCATAACTTACTTCACTTACATACAACATTTATTCATTTGGGGTGGCATTCTTTTTTGGTATATTTTCCTCCTAATATATGGAACTATTAACCCTTTATTATCAACCACTGCTTATAAAGTCCTAATTGAAGCTTGTGCACCAGCACCATCTTACTGGCTCATAACTCTCCTTGTACTTGTTGCTTCACTCCTTCCGTATCTTGTATACACTTCGATCCAACTGCGGTTCTTTCCTATGTTTAATCAAATGATACAGTCGAGAAGTAATGATGGGCAGGCAATTGATCCAGAATATGTTAATGTTGTGCGACAACAATCAATAAGACATATAGTAGTTGGATTCACAGCTCGATTCGAAGCATCAAACACTTCACGCGGCTGA 3537 0.3786 MGGGRTRKKRNQLSRIHAFSSGKTSFKGEHSLIGGPGFGRIVYCEENESGVNYCDNYVRTTKYTMFTFIPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAATIGKEAVEDWRRMKQDIEMNNRKVKVHKGEGVFDYSKWRDLNVGDLVKVEKDEFFPADLILLSSSYEDAICYVETMNLDGETNLKLKQALDETSKFLEDSTFRNFKAIIKCEDPNAYLYSFIGNIELEDQLYPLSPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDSPSKRSKVEKRMDKIIYFLFSVLFFISFIGSIFFGITTSEDIENGVMKRWYLRPDDTTIYYNPKKAPIAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINHDVHMYYEETDQPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGRGVTEVERALARRKHLDGNVAEISEAKSSIKGFNFTDERIMNGNWVKETHANVIQNFIRLLAVCHTAIPEVDEETGNVSYEAESPDEAAFVIAAKQLGFEFYERTQTTISLCEFNSTISRTIRRSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGREFEEKTKQHINEYADAGLRTLILAYRELDEQEYNLFNKELMEAKSLVSADREQIVEEVLEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINVGFACSLLRQGMKQIIISSDTPDIKSLEKVENNSAVAFEIKANVISQLREGKELLTASNVKSEALALVIDGKSLTYALEDDVKDLFLTFAVGCASVICCRSSPKQKALVTRLVKIKTGCTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIAFGITLFLYEIYASFSGQVAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCLEFPLLYQEGVQNVLFSWKRILGWAFNGVTSAITVFFFCINAIENQAFRKGGEVVGLEVLGATMYTCVVCVVNCQMALSITYFTYIQHLFIWGGILFWYIFLLIYGTINPLLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYLVYTSIQLRFFPMFNQMIQSRSNDGQAIDPEYVNVVRQQSIRHIVVGFTARFEASNTSRG 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01775 1178 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Tsu06g01775 1178 Gene3D - 528 687 IPR023299 GO:0000166
Tsu06g01775 1178 Pfam Cation transport ATPase (P-type) 511 615 - -
Tsu06g01775 1178 SFLD p-type atpase 406 903 IPR044492 -
Tsu06g01775 1178 Gene3D - 688 892 IPR023214 -
Tsu06g01775 1178 PRINTS P-type cation-transporting ATPase superfamily signature 852 871 - -
Tsu06g01775 1178 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Tsu06g01775 1178 PRINTS P-type cation-transporting ATPase superfamily signature 738 748 - -
Tsu06g01775 1178 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 818 935 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu06g01775 1178 Gene3D - 112 284 - -
Tsu06g01775 1178 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 5 1175 - -
Tsu06g01775 1178 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1130 IPR023298 -
Tsu06g01775 1178 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 53 1137 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tsu06g01775 1178 SFLD Haloacid Dehalogenase 406 903 - -
Tsu06g01775 1178 Pfam Phospholipid-translocating ATPase N-terminal 45 103 IPR032631 -
Tsu06g01775 1178 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1175 - -
Tsu06g01775 1178 SUPERFAMILY Calcium ATPase, transduction domain A 139 282 IPR008250 -
Tsu06g01775 1178 CDD P-type_ATPase_APLT_Dnf-like 55 1012 - -
Tsu06g01775 1178 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 487 690 IPR023299 GO:0000166
Tsu06g01775 1178 SUPERFAMILY HAD-like 417 907 IPR036412 -
Tsu06g01775 1178 Pfam Phospholipid-translocating P-type ATPase C-terminal 880 1130 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01775 Tsu-Chr6 20559293 20567445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01775 2 1176 Primary Pumps ATPases AT1G68710 68.365 0.0 1741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01775 K01530 K14802 gmx:100797039 1946.78