Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01763 ATGAACAATCTCCTTGGAGAGGAAAGGGAGCAATATCAGAAGAAGAGGAAATCTTGTGATGAAGCCTCTACAAACTTGAGGACATCAAAGAGAAGATTATGCAATAACAAAAATGAAGAAGAGGGAAACAACTACAACAAATCAATCTCAACAACACTAAAGCTTTACGATGATCCGTGGAAGATAAAAAAGACGCTGACGGACAGTGATCTAGGAATCTTGAGCAGACTATTGTTAGCTGCAGACTTGGTGAAGAAACAAATTTTGCCTATGTTGGATCTCGATGATGCAAGAGCTGCAGAGACCGAGGAAGGATCCCCGGTCAATGTTTGGGACGTGGAAACAAATTCCATGCACCAACTTGTTCTAAAGCGATGGTCTTCGTCTAAGAGTTATGTTCTTATTGGTAAGTGGAACCATGATTTCGTGAGAAGAAGAGATCTCAAGAAAGGAGATGAAATTGGATTTCAATGGGATCCTTTTAACCGCGCTTTCAATTTCTGTGTTCTTAAACGGGCTACCATGCCTCAATAA 534 0.4064 MNNLLGEEREQYQKKRKSCDEASTNLRTSKRRLCNNKNEEEGNNYNKSISTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLDLDDARAAETEEGSPVNVWDVETNSMHQLVLKRWSSSKSYVLIGKWNHDFVRRRDLKKGDEIGFQWDPFNRAFNFCVLKRATMPQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01763 177 Gene3D - 59 174 IPR015300 -
Tsu06g01763 177 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 172 - -
Tsu06g01763 177 SUPERFAMILY DNA-binding pseudobarrel domain 58 167 IPR015300 -
Tsu06g01763 177 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 172 - -
Tsu06g01763 177 CDD B3_DNA 60 171 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01763 Tsu-Chr6 20371025 20371558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01763 62 156 RAV Transcription Factor Family AT1G50680 36.275 3.55e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01763 - - pvu:PHAVU_009G204600g 267.7