Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01753 ATGAACAGGAATTTAACAGCAATGAACAAACTGCTTATGGAGAAAAATGACAGATTGCAGAAACAAGTGTCACAGCTTGTGTATGAGAACACCTTTTTCCGCCAACATACAGAAAATACGACCCTAGCTACGACGGACACGAGTTGTGAGTCGGTGTTAACGAGCGGTCAGCAGCATCCGCCAAGGGATGCTAGCCCTGCTGGACTTTTGTCCGTTATAGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCTACTGGAACCGCCGTTGAGTGGGTCCAAATGCCCGGTATGAAGCCTGGTCCGGATTCCATTGGAGTCGTTGCAATTTCTCATGGTTCCCCTGGAGTGGCTGCACGTGCTTGCGACCTTGTGGGTTTAGAACCTGCCAGTGTTGCCGAAATCCTCAAAGATAGACTTTCATGGCATCGTGATTGCCGAACCATGGATGTTCTAAATGTTATGTCCACAGCAAGTGGAGGAACCATTGAATTGCTTTACATGCAGAGGTCAAGTTCATCCCGTCCGAAGCTCTTCTCCTTAAATTGA 546 0.4744 MNRNLTAMNKLLMEKNDRLQKQVSQLVYENTFFRQHTENTTLATTDTSCESVLTSGQQHPPRDASPAGLLSVIEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGVVAISHGSPGVAARACDLVGLEPASVAEILKDRLSWHRDCRTMDVLNVMSTASGGTIELLYMQRSSSSRPKLFSLN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01753 181 Coils Coil 2 29 - -
Tsu06g01753 181 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 169 - -
Tsu06g01753 181 Pfam START domain 73 168 IPR002913 GO:0008289
Tsu06g01753 181 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 169 IPR044830 GO:0003700
Tsu06g01753 181 SUPERFAMILY Bet v1-like 72 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01753 Tsu-Chr6 20110139 20111643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01753 1 168 Homeobox Transcription Factor Family AT1G52150 76.301 7.89e-90 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01753 K09338 - lja:Lj0g3v0278949.1 292.352