Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01750 ATGAGTCTCCGCAAAGGCTCCAAGGTTTGGGTACCTGATAGGGATTTCGCTTGGTTTCCTGCTGAAGTTCTCGAATCTTCCAATAAACAACTTCGCATTCAAACCGATTCCGGCAACAAGATTATTGTTATTGCTCCGGAGAAAATATTTTCGAGAGATGCCGATGAAGACGAGCACGGTGGAGTTGAAGATATGACGAGATTAGCTTATTTGAATGAACCAGGCGTGTTGTACAATATTCTGAGAAAATATGCTCTTAATGATATTTATGTAAGTCTTTATTGCTGA 288 0.4028 MSLRKGSKVWVPDRDFAWFPAEVLESSNKQLRIQTDSGNKIIVIAPEKIFSRDADEDEHGGVEDMTRLAYLNEPGVLYNILRKYALNDIYVSLYC 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01750 95 Pfam Myosin N-terminal SH3-like domain 6 43 IPR004009 GO:0003774|GO:0005524|GO:0016459
Tsu06g01750 95 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 54 IPR004009 GO:0003774|GO:0005524|GO:0016459
Tsu06g01750 95 Gene3D Kinesin motor domain 8 94 IPR036961 -
Tsu06g01750 95 PANTHER MYOSIN 3 91 - -
Tsu06g01750 95 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 90 IPR027417 -
Tsu06g01750 95 PANTHER PROTEIN OPAQUE1-LIKE 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01750 Tsu-Chr6 20079235 20079604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01750 1 91 Myosins gene family AT4G33200 57.143 4.42e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01750 K10357 - gmx:100804699 137.887