Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01749 ATGGATCCTGAACGAAATTATCACTGCTTTTACCAGTTGTGTGCATCTGAAAGGGATGTAGAAAAGTACAAGTTAGGATATCCAAGCCACTTCCATTATTTGAATCAAAGTAAAGTTTATGAATTAGACGGGGAAGCCATATTTCGCACTTTAGCTGTAATTCTACATATGGGAAATGTTGAATTTTCTCCTGGGAAACAGCTTGACTCATCAATAATAAAGGATGAGAAATCAACATTTCATTTGCAGATGGCTGCTAACCTTTTCAAGTGTGATATGAACCTACTACGAGCAACATTATGTACTCGTACAATACAAACCCGCGAAGGAAATATTGTCAATGTGGAATTATGA 354 0.3644 MDPERNYHCFYQLCASERDVEKYKLGYPSHFHYLNQSKVYELDGEAIFRTLAVILHMGNVEFSPGKQLDSSIIKDEKSTFHLQMAANLFKCDMNLLRATLCTRTIQTREGNIVNVEL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01749 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 112 IPR027417 -
Tsu06g01749 117 Gene3D - 5 46 - -
Tsu06g01749 117 PANTHER MYOSIN 3 44 - -
Tsu06g01749 117 PANTHER MYOSIN 43 114 - -
Tsu06g01749 117 Gene3D Myosin VI head, motor domain, U50 subdomain 47 117 - -
Tsu06g01749 117 ProSiteProfiles Myosin motor domain profile. 1 117 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu06g01749 117 PANTHER MYOSIN-15 3 44 - -
Tsu06g01749 117 PANTHER MYOSIN-15 43 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01749 Tsu-Chr6 20041409 20042997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01749 2 115 Myosins gene family AT4G33200 59.420 7.57e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01749 K10357 - gmx:100796413 198.749