Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01721 ATGGCGAATGATACCCAATCTCGCACCACTGTTCATAAGATGGCTTACATGGAACAGTTTATCCATGAACTTAGCGAACCTAATCTTCGAGAAAATGCTATTCATGAGCTCGCCAAGaTGAACGAGTTATTTCATAAACTTGCACCTTTATTGTGGAATTCTTTTGGTactattacaatatttttacagGAAATAATTTCAATATATCCAACTCTTCCACCGGAGTCTCTTACCTCTGCACAATCAACTCGAGTGTGCAATGTTCTTACACTACTTTATaaaatatatattaggtCTATATCCATTAATTATATTTACCTTTTCTTATCCGCAGCTGACATACCTCTGTATTTGTATCCTTTCCTTGATACGACAAACAAGTTACCACAATTTGAGAATTTGAGAGTTTCTAGTCTTGGAGTCATTGGTGCCTTAGTGAAGGTTAGCACCAAAGAAGTTATAAGTTTCTTTCTTACGAGGGAGATAATTCCTCTGTGCTTGCGTAATATGGAAAACGGCAACGAGGTGTCAAAAAATGCAACCCTGTTGCCCCAAACTCTTATGAATCTCATCTTAGGAATCTCATCAAGGTCATGGGATTTGCCGGAGTATGATAGgAAGACCCAACTACTTGGATGTGGGCAAAACAGTTGTATGACAATGTTATGGACTAACCAAGTTCGTCGTCTAGGAGGAACCAATGATATTGTGGGATCATCAGCATCCGAATAA 732 0.373 MANDTQSRTTVHKMAYMEQFIHELSEPNLRENAIHELAKMNELFHKLAPLLWNSFGTITIFLQEIISIYPTLPPESLTSAQSTRVCNVLTLLYKIYIRSISINYIYLFLSAADIPLYLYPFLDTTNKLPQFENLRVSSLGVIGALVKVSTKEVISFFLTREIIPLCLRNMENGNEVSKNATLLPQTLMNLILGISSRSWDLPEYDRKTQLLGCGQNSCMTMLWTNQVRRLGGTNDIVGSSASE 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01721 243 PANTHER UNCHARACTERIZED 6 188 - -
Tsu06g01721 243 Pfam Cell differentiation family, Rcd1-like 21 180 - -
Tsu06g01721 243 Gene3D - 9 196 IPR011989 -
Tsu06g01721 243 PANTHER DIFFERENTIATION PROTEIN RCD1, PUTATIVE, EXPRESSED-RELATED 6 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01721 Tsu-Chr6 19433359 19439184 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tsu06g01721 Rcd1 6.9e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01721 K12606 - csv:101204529 190.274