Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01665 ATGGAATTTGATAATGGTAAAAAGAATCATCATAGCTGCACATTTAGAGAACTGAAGTTGGTTTCATTTGTAGTTTTATGCCTCATTCTAATCTCTCCTGCTGAGGCATTTGATCCATTGGATCCAACTGGAAATGTGACAATTAGATGGGATATCATGTCTTGGACATCAGATGGGTATATGGCAACTGTAACATTATTTAACTTTCAACTATACCGAAATATTATGAGCCCTGGATGGACACTAGGATGGACATGGGCGAAGAAAGAAATCATATGGGCTATGATGGGAGCACAAGCTACAGAACAAGGAGACTGCGCAAAGTTCAAGTTAAAGATTCCTCATAGTTGTAAAAGGAGTCCTCAAGTTGTTGATTTATTACCAGGAGCTTCTTTCAATATGCAATACACAAATTGTTGCAAAGGTGGTGTGTTAACTTCTTGGGGACAGGATCCTTCAGGTGCAATCGCGGCATTTCAAATGGGTGTAGGACTCTCTGGAAGAACTAACAAGACAGTAAAACTCCCTCAGGATTTTAAATTGCTTGGACCGGGAGCCGGATATTCGTGTGGCCCTGCTAAAAGAGTTCCTTCAACTGTTATTCTTACAGATGACCGTAGGCGAAAAGCTCAAGCTTTGATGTCCTGGAATGTGACATGTACTTATTCACAATTTCTTGCCTCGAAGAACCCTAGCTGTTGTGTTTCTTTGTCAACCTTCTACAATGACCAAGTCACAGCTTGCCCAACCTGTGCTTGTGGTTGTCAAAATAATGCTACCTGCGTCACGAAAGAATCAAAGATACTGAAAGAGGCTGAGAATAATAAGACTATGAAGAGTGATATTATTATGACACCAAAACCATTGTTACAATGTACGCGCCACCTTTGTCCTGTTCGTGTGCATTGGCATATAAAAGACAACTATAAGGATTATTGGCGCGTGAAGATTGCAATCATCAACTTCAACTATAGAATGAATTACACGCAATGGGGTCTTGTTGTGCAACACCCTAATCTTAATAATGTTACACAAGTCTATAGCTTTGAATACATGGCACTTCTTCCCTATCAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAATACTACAATGATCTATTAATGGAAGCTGGGGCAAAAGGGAATGTACAATCTGAGGTACTTATGAAGAAGGACAAGAATACCTTTACACTCAAGCAAGGATGGGCTTTTCCTAGAAGGGTATACTTCAATGGTGATGAATGTATGCTACCACCTCCTGATTCATATCCATTTTTGCCAAATTCTGCTGATAGGTTACCAACAAGTGTTGTAACAATGGTAGCCTATGTGATTTTTGCATTGTTTTTCATTTGGTTTTGA 1368 0.3947 MEFDNGKKNHHSCTFRELKLVSFVVLCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMSPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDPSGAIAAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSTFYNDQVTACPTCACGCQNNATCVTKESKILKEAENNKTMKSDIIMTPKPLLQCTRHLCPVRVHWHIKDNYKDYWRVKIAIINFNYRMNYTQWGLVVQHPNLNNVTQVYSFEYMALLPYQAINDTGMFYGLKYYNDLLMEAGAKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSADRLPTSVVTMVAYVIFALFFIWF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01665 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Tsu06g01665 455 PANTHER COBRA-LIKE PROTEIN 1 453 - -
Tsu06g01665 455 PIRSF COBRA 10 455 IPR006918 GO:0010215|GO:0031225
Tsu06g01665 455 PANTHER PROTEIN COBRA 1 453 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01665 Tsu-Chr6 18215401 18218208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01665 12 455 COBRA Gene Family AT3G02210 56.600 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01665 - - gmx:100813134 815.839