Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01664 ATGGAGTCTATTGTAGTTTTAGTCTTGTTACTCTTCTCTTGCTCCACATTCACTTCTACAGAAGCCTATGATCCGTTAGATCCAACTGGAAATATAACACTCAAATGGGATGTCATGAGTTGGACTGCAGATGGCTATGTTGCTATTGTTACAATGTACAACTTTCAACAATATCGACATATTCAAGAGCCAGGATGGACACTGGGGTGGACATGGGCTAAAAAGGAAGTAATTTGGAACATGATGGGAAGCCAAACAACAGAACAAGGAGATTGTTCGAAATTCAAAGCAGGAACTCCACATTGTTGTAAGAAAGATCCAACGGTAGTTGATATGTTGCCAGGAACTCCATACAATCAACAGATTGCAAATTGTTGCAAAGGTGGAGTCTTGAATTCATGGGCTCAAGATCCAAGCAATGCAGTTAGTTCTTTTCAACTTAGTGTTGGTTCTGCCGGAACAACTAATAAAACAGTGAAACTTCCAAGGAATTTCACACTCAGAGCACCTGGTCCTGGTTATACTTGTGGTCCTGCGAAAATTGTTAGACCAACACAATTTATTACCAGTGATAAGAGGAGGGTGACACAAGCCTTGATGACATGGAACATTACTTGTACTTACTCTCAATTCTTGGCTCAAAAGACACCAACTTGTTGTGTTTCACTCTCTTCCTTCTATAATGACACAGTAGTAAACTGCCCAACCTGCACATGTGGCTGCCAAAACAAAACACAACCTGACAGTTGTGTAAATCCAGACTCTCCACATTTATCTTCAATAGTATCATCATCGGGGAAACCTGCAAATACACCTCTAGTCCAATGTACAAGTCACATGTGTCCGATACGAGTGCATTGGCACGTGAAGCTCAATTATAAAGAGTATTGGAGGATCAAGATCACAATCACAAATTTCAATTACAGAATGAACTACTCGCAATGGAATCTTGTGGTGCAGCATCCCAATTTTGATAATCTTACTCAACTTTTCAGCTTTAAGTACAAGTCACTGAATCCCTATGAGGGCTTAAATGATACTGGTATGTTGTGGGGAGTAAAATTCTACAATGATTTTCTTTCATCAGCTGGAGCATTTGGAAATGTGCAATCAGAAATCTTATTTAGAAAAGACAAGTCGACTTTCACATTTGACAAAGGATGGGCTTTTCCAAGAAGGATTTATTTCAATGGCGATAACTGTGTTATGCCTCCTCCAGATGCATATCCTTGGTCACCAAATGCATCTTCAaatcttgttttttctttacttaGTACACTCATAGCCACTTTAGCTTCTTTATTAATCATATTGAATTGA 1320 0.3871 MESIVVLVLLLFSCSTFTSTEAYDPLDPTGNITLKWDVMSWTADGYVAIVTMYNFQQYRHIQEPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGTPHCCKKDPTVVDMLPGTPYNQQIANCCKGGVLNSWAQDPSNAVSSFQLSVGSAGTTNKTVKLPRNFTLRAPGPGYTCGPAKIVRPTQFITSDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTVVNCPTCTCGCQNKTQPDSCVNPDSPHLSSIVSSSGKPANTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLNPYEGLNDTGMLWGVKFYNDFLSSAGAFGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWSPNASSNLVFSLLSTLIATLASLLIILN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01664 439 PIRSF COBRA 1 439 IPR006918 GO:0010215|GO:0031225
Tsu06g01664 439 PANTHER COBRA-LIKE PROTEIN 4 436 - -
Tsu06g01664 439 PANTHER PROTEIN COBRA 4 436 IPR006918 GO:0010215|GO:0031225
Tsu06g01664 439 Pfam COBRA-like protein 46 209 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01664 Tsu-Chr6 18211343 18215028 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01664 6 438 COBRA Gene Family AT3G02210 72.811 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01664 - - gmx:100815779 825.854