Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01661 ATGACAGTTATTATAAGAAGAAACGTGATTTTTCTCCTAAAAACTTATGCAACTAATTTCAGTACTATTTCTAATCACACCACATCTCATTACAGAAAACAAATTTCACTTGCTAATATCTTTCAAACCTATGGTTTCCCTTCTTCAACACTTCACAATTTCATCTCCAAAAATCACTTCCTCTTCAATTTCGATCCATCCGAGCTTCGTAAATCGTTAACCACCCTACTTTCCTTCCGAATTCCGCAGAAAACTGTAATTTCACTCGTTCACGATTGTCCTTCTGTGTTGGAACCTCAATTTCTACATAATTGGGAATTAGGTTTTCCCCAATTGAAATCCAACGTTTGTAATCCTTCCCCGTTGATGATTGCAAATTTGTTGCGATGTTCTAGAAGGTTCGATTTAAATCCCCTTGAAATGTTCGAAAAAGTTGAGGTTTTTAGAGGTTTAGGGTTTTCTGATGATGTTGTGGTTAGGGTTTTGGAAGAATTTCCCAGTGCGGTTGTAATGAGCGAATGTGAAATTGTTGGCGTGGTTGATTTTCTTGTGGAATTTGGTGTTTCTAGAGATGAAATTGATAGAGTTGTTAGATTGTATCCTAGGGTTTTTGGATTTGGAGTTGAAAATAGGTTGAAACCGTTGATTCATGAGTTGAGTGGTTTGGGGTTTTTGCGACGTGAAGTTAGGGCGGAGGTTGTTAGGGATCCAAGGATCCTGGGAATGGAAATTGGGGAATTTTCGCGGTGTTTGAAGTTGTTGCAGAGTTTGAAATGCAGGGAGGCAATTAAAGAGAGGATTTTTGGAGAGGGTTTGGTTAGGGCTTGTTTTGAAGTGAAGCTGAGAGTCGATTGTTTATGCAGTCACGGTTTGATTCGTAGGGATGCTTTGAAGGTATTGTGGAAGGAGCCAAGGTTGATGACTTATGATGTGGAGGATATTGAGAAGAAGATTGAGTTTTTAGTTCATAGGATGAACTATGGTATTGATTGTTTGCATGAAGTTCCTGAATACTTGGGTGTGAATTTTGAAAAGCAGATTGTTCCTAGATACAATGTGATCGAGTATTTGAATGGAAAGGGTGCAATTGGGTTTGAAGTTGGATTGAAGGACCTTATCAAACCAACTAGGCTTAGATTTTATAACCTTTATGTCAAGCCTTACCCTGAATGTGAAAAAATATATGGCAGATTTTCGGGTAAGGTTGAAATTAAAAGAAAGCATCCAGCTGGACTTTGGAAGCTGTTCAAACCACAAAAGTTTACTCAAACCGACAAAGATGTGAAGAACATGAAGGCTTTCATGGGTTCACTGGTGTAG 1320 0.3841 MTVIIRRNVIFLLKTYATNFSTISNHTTSHYRKQISLANIFQTYGFPSSTLHNFISKNHFLFNFDPSELRKSLTTLLSFRIPQKTVISLVHDCPSVLEPQFLHNWELGFPQLKSNVCNPSPLMIANLLRCSRRFDLNPLEMFEKVEVFRGLGFSDDVVVRVLEEFPSAVVMSECEIVGVVDFLVEFGVSRDEIDRVVRLYPRVFGFGVENRLKPLIHELSGLGFLRREVRAEVVRDPRILGMEIGEFSRCLKLLQSLKCREAIKERIFGEGLVRACFEVKLRVDCLCSHGLIRRDALKVLWKEPRLMTYDVEDIEKKIEFLVHRMNYGIDCLHEVPEYLGVNFEKQIVPRYNVIEYLNGKGAIGFEVGLKDLIKPTRLRFYNLYVKPYPECEKIYGRFSGKVEIKRKHPAGLWKLFKPQKFTQTDKDVKNMKAFMGSLV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01661 439 Gene3D Transcription termination factor 3, mitochondrial 172 398 IPR038538 -
Tsu06g01661 439 PANTHER CGI-12 PROTEIN-RELATED 49 435 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 49 435 - -
Tsu06g01661 439 SMART mt_12 159 189 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 SMART mt_12 52 82 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 SMART mt_12 194 225 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 SMART mt_12 124 154 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 SMART mt_12 230 260 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 Pfam mTERF 136 250 IPR003690 GO:0003690|GO:0006355
Tsu06g01661 439 Pfam mTERF 282 374 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01661 Tsu-Chr6 18145868 18147187 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu06g01661 mTERF 9.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01661 - - cam:101513737 747.273