Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01659 ATGATAGACGCTCAGGTGGACATGGGCGAAGGAGGAATGGTGGATAAGTTGTCAAGAACACCTTACAACCTCAAGGTTGCCAACTGCTGCAAAGCTGGAGTCTTGAGTTCATTAGCTCAAGATCCAAGCAATGCAGTAAGTATGTTCGAGATTACTGTTGGTTCTACTGGAACAACTAGTAAGTCTATTCAACTTCCAAAAAACTTCACCCTCAAAACACCTGATCATGGTTATACTTGTGGTCCTACAAAGATTGTTAGACCAACTCAGTATCTTACCAGTGATAAGAGAATAGTCTCACAAGCTTTCAGTAAGTTTCGTCTGTTTTTTCCTTGCCACACTATTCAAATTTGA 354 0.4068 MIDAQVDMGEGGMVDKLSRTPYNLKVANCCKAGVLSSLAQDPSNAVSMFEITVGSTGTTSKSIQLPKNFTLKTPDHGYTCGPTKIVRPTQYLTSDKRIVSQAFSKFRLFFPCHTIQI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01659 117 Pfam COBRA-like protein 13 107 IPR006918 GO:0010215|GO:0031225
Tsu06g01659 117 PANTHER COBRA-LIKE PROTEIN 12 105 - -
Tsu06g01659 117 PANTHER PROTEIN COBRA 12 105 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01659 Tsu-Chr6 18128911 18129355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01659 13 108 COBRA Gene Family AT3G02210 55.208 2.45e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01659 - - lja:Lj1g3v0569370.1 133.65