Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g01655 ATGGCCTTGGAACTTGTGGGTGGAGCTTTCTTAGAGGCTGGTTTTGGTGTTTTGCTTGAAAAAATAGCCTATCCTGCAGTGGTCAAATTCTTTAGGAAAACTAAAAGCAGTGACATGCTACTCAAGAAGTTGAAGATCTCCTTGTTATCCATTCATGCAGTACTCAGTGATGCAGAGGAAAAACAAATGAGAAATGCGTCTGTGAAGGAGTGGATGGAGGAACTTAAAGATGTTGTCTTTGATGCTGATGATCTAATGGATGAGATATGTACTTATGCAAAGATAGagatgatgatgatgataaaccCGAACTTTACTACTACTGCTGCTGTTAATTTGCATGATGTTGAACATGAACAGAAAGTACAAGACATAATTGAAAGATTAGAATTTATCATAAAGCAGAAAGATATGTTTCAACTGCAAATGGGTAAAGAAGTAAAAATCCTACCAAAGCAACCAACTTCATCTGTAGTGGGATCAAGCGTTGTGTATGGTAGGGAGGATGATAAAGAGGCCTTAATGAAATTGCTATTTTCCGATGATGTAGACGGTGAATGCAATATAAGTGTGATTCCCATAGTTGGTATGGGAGGGATTGGAAAAACCACCTTAGCTCAATTTGTTTACAATGATGAAAAAGTTCAAAAGGAATTTGATCTCAAAGCTTGGGTTTATGTGTCTGAGCAGTTTGATATTCTCAAGATCACAAAAACCATTGTGGAAGAGATCACTTCATGCAGTTGCAGTACTGAAGATTTGAATTATCTCCAACAAGATTTGAAGAAAAGGTTGTTAAAGAAAAAGTTTTTGTTCATTTTAGATGATGTATGGAATCAAAATTACATTAAATGGGAAACTTTGAAGAATCCATTTGTGTATGGTGCTCCTGGTAGTAAGATTATTGTAACAACAAGAATTGCTCATGTTGCGTCGATTATGCAGACTGTTGAGCCTTATTATCTTTCTGAGCTGTGTGATGATGATTGTTGGATGTTGTTCTCAAAACATGTATTTGGATATGCAGATTCAAATACTCATccaaatttaagaaaaattggtctaaaaataattaaaaagtgcAAAGGATTGCCTTTGGCTGTGAAGACACTTGCAGGACTTCTGAGATCGAAAGTTGATACAAGAGAATGGTACAAAGTACTTAACAGTGAGATATGGGATTTGCAAGATGATGAGAGCAATATACTCCCAGCTTTGAGATTAAGTTATCATTATCTTCCATCACATGTAAAGAGATGTTTTGCTTATTGTTCGGTTTTTCCGAAAGATTATGAATTTGAGAAGGAGAAATTGATCTTACTGTGGATGGCAGAAGGTTTGCTACAACAATTGAGAAGACACAAGAGAATTGAAGAAGCCGGAGATGAGACCTTTTGTGAACTTGTGTCTAGATCATTTTTTCAGCAATCGAAACGCAATAAGTCGTGTTTTGTAATGCACCATTTTGTAAATGATTTAGCTCAATTTGTATCTGGAAAATTTTCTGTCAGGGTAGAAGGCAATTATGGTGAAGTGGAAGAAAGTGCTCGATATTTATTGCATTTGGTTGCATGTAAATTCCCTGCTGTACATTGGAAGGCCATTCGCAAAGCTGTTCACTTAAGAACCTTCATGGAACTAAGGTTAGTAGATAAATCTGTGAGCTTTATTGATGAGATTCCACACGACTTGTTGATAAAGCTCAAGTGTTTAAGGGTGTTATCTTTGGAAGGAATATATCATAAGGGGTTGCCTGATTCAGTTACCGGATTAATACATCTCCGGTATCTTGATCTTTCTGGGGCTAAGATGCACATGTTGCGGGAAAGCATTGGTAGTTTGTACAATTTGGAAACTCTGAAGCTGGTTGGATGTTCTAACCTACAAGAACTTCCTAACGATTTCCATAAGCTAGTTAACATACGTTACTTAGATATTACTTTTACGAGTTTGAAATGGATGCCATTGTTTATGAGTGCATTGACAAACCTACAAAATCTAAGTGACTTTTTTGTAGGAAAAGAATATGGATCTTCAATTGGTGAACTAGGAGTATTATCTGATTTACATGGATCATTGTTCATTCACAATATTGAACATATTGGCTTTGTGGATTCTGAAAAAGCCAAGTTGAATGAAAaggaatttctccaaaagttaACTTTGGAATGGGGTGAGAATTCTGACACTGAAAATTCACAGCAAGAAAAAGCAATACTGAACATGTTACAACCACATATAAATCTTAAAGAGCTTTCTATTTATAACTACCTCGGGACAGAATTTTCTAATTGGGTGGGAAACTCTATTTTCCGCAACGTGTTGTTCATCGAGCTTAAGGGTAGTAAATATTGCTGTAAACTACCTACACTTGGGAAACTTCCTTCTTTAAAAGAGTTACGGATTGCTAAATTCGATGGATTAGTGAGCGTGGGGTCCGAGTTTTATGGGAATGAAACTTGTTCTTCTGTTGTAACCGAGAGCTTTGGTTCCTTAGAAACTCTTCGGATTGAGAACATGTCAGCTTGGGAGGATTGGAAGCAACCTAATGAGACTAACAAAGCTTTTGCAGTACTGAAAGAACTTCATATAAATAGTTGTCCTAGATTGACAGGAGATTTACCGATTAACCTTCCATCATTGACATTACTTGTCATCAGAGATTGCAAGAAGCTCATTTCTTCGCTTCCAACAACTTCATCTTTGCGAGTATTTAACATTGACAACTGTGGGAACTTAAAATTTCCATCACGCATATATCAGTTTAACCAGACACTCACATCCATGTACTTACACAATAGCTTTGATTCACTTGAGCTATTGTCGTTAGATATCTTTCCAAACCTCAAGTCCCTGGATGTTTCTGGTTGTAAAAATCTAAAAGCAATTACAATTTCAGGGAAAATGCGACTCCGTCCTCCAATTCTTGATTCGTTGTGTTCCTTGTCCATAAGTAACTGTCCAAAGTTGGTATGCTTTCCAACAGAAGGGTTCTTTGCCCCAAAGCTGACGTTGTTGAGTATTGACAACTGTGAGGAGCTCAAGTCCTTGCCCCCGAAAATGGATCACCACATGCCGAGCTTGATAGAACTACAACTATGGAGATGTCCACAAATTCAGCCAATTGAAAAGTGGCCTACTGATTTGAGATCAGTTAGTATATGGAACTGTGACCAACTCATTGCCCGTCAGTTAGAGTGGAAACAATCCAATCCCATCGATTTTACAGACTTAACAGCGTCTCAGGCTTTCACTGTCAAATCTGAAGATTGCTTCTCAACAATTACCAGTTCAACTCTTGTCTCTGAGATTGATAGGAAAGCATTATCAAGCTCTTCTCAGAAAAAATCGTTTGTTAAAAGAGTATTCAGATGA 3375 0.365 MALELVGGAFLEAGFGVLLEKIAYPAVVKFFRKTKSSDMLLKKLKISLLSIHAVLSDAEEKQMRNASVKEWMEELKDVVFDADDLMDEICTYAKIEMMMMINPNFTTTAAVNLHDVEHEQKVQDIIERLEFIIKQKDMFQLQMGKEVKILPKQPTSSVVGSSVVYGREDDKEALMKLLFSDDVDGECNISVIPIVGMGGIGKTTLAQFVYNDEKVQKEFDLKAWVYVSEQFDILKITKTIVEEITSCSCSTEDLNYLQQDLKKRLLKKKFLFILDDVWNQNYIKWETLKNPFVYGAPGSKIIVTTRIAHVASIMQTVEPYYLSELCDDDCWMLFSKHVFGYADSNTHPNLRKIGLKIIKKCKGLPLAVKTLAGLLRSKVDTREWYKVLNSEIWDLQDDESNILPALRLSYHYLPSHVKRCFAYCSVFPKDYEFEKEKLILLWMAEGLLQQLRRHKRIEEAGDETFCELVSRSFFQQSKRNKSCFVMHHFVNDLAQFVSGKFSVRVEGNYGEVEESARYLLHLVACKFPAVHWKAIRKAVHLRTFMELRLVDKSVSFIDEIPHDLLIKLKCLRVLSLEGIYHKGLPDSVTGLIHLRYLDLSGAKMHMLRESIGSLYNLETLKLVGCSNLQELPNDFHKLVNIRYLDITFTSLKWMPLFMSALTNLQNLSDFFVGKEYGSSIGELGVLSDLHGSLFIHNIEHIGFVDSEKAKLNEKEFLQKLTLEWGENSDTENSQQEKAILNMLQPHINLKELSIYNYLGTEFSNWVGNSIFRNVLFIELKGSKYCCKLPTLGKLPSLKELRIAKFDGLVSVGSEFYGNETCSSVVTESFGSLETLRIENMSAWEDWKQPNETNKAFAVLKELHINSCPRLTGDLPINLPSLTLLVIRDCKKLISSLPTTSSLRVFNIDNCGNLKFPSRIYQFNQTLTSMYLHNSFDSLELLSLDIFPNLKSLDVSGCKNLKAITISGKMRLRPPILDSLCSLSISNCPKLVCFPTEGFFAPKLTLLSIDNCEELKSLPPKMDHHMPSLIELQLWRCPQIQPIEKWPTDLRSVSIWNCDQLIARQLEWKQSNPIDFTDLTASQAFTVKSEDCFSTITSSTLVSEIDRKALSSSSQKKSFVKRVFR 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g01655 1124 Gene3D - 325 408 IPR042197 -
Tsu06g01655 1124 Gene3D Ribonuclease Inhibitor 889 1085 IPR032675 -
Tsu06g01655 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 424 IPR027417 -
Tsu06g01655 1124 SUPERFAMILY L domain-like 901 1057 - -
Tsu06g01655 1124 Gene3D - 149 318 IPR027417 -
Tsu06g01655 1124 PANTHER OS05G0414200 PROTEIN 31 873 - -
Tsu06g01655 1124 Pfam NB-ARC domain 168 409 IPR002182 GO:0043531
Tsu06g01655 1124 Pfam Rx N-terminal domain 26 94 IPR041118 -
Tsu06g01655 1124 Gene3D - 16 136 - -
Tsu06g01655 1124 PRINTS Disease resistance protein signature 944 960 - -
Tsu06g01655 1124 PRINTS Disease resistance protein signature 191 206 - -
Tsu06g01655 1124 PRINTS Disease resistance protein signature 361 375 - -
Tsu06g01655 1124 PRINTS Disease resistance protein signature 264 278 - -
Tsu06g01655 1124 PANTHER DISEASE RESISTANCE PROTEIN RP 31 873 IPR044974 GO:0006952
Tsu06g01655 1124 Gene3D - 409 496 IPR036388 -
Tsu06g01655 1124 SUPERFAMILY L domain-like 520 957 - -
Tsu06g01655 1124 Gene3D Ribonuclease Inhibitor 533 841 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g01655 Tsu-Chr6 18089063 18092884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g01655 188 481 WRKY Transcription Factor Family AT5G45050 24.214 2.85e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g01655 - - ccaj:109812375 1207.97